Gene: Tgm1 (transglutaminase 1) Rattus norvegicus
Analyze
Symbol: Tgm1
Name: transglutaminase 1
Description: ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); ASSOCIATED WITH Chloracne (ortholog); congenital ichthyosiform erythroderma (ortholog); Dry Eye Syndromes (ortholog); FOUND IN cell-cell adherens junction (ortholog); intrinsic component of membrane (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: epidermal TGase; glutamine gamma-glutamyltransferase K; protein-glutamine gamma-glutamyltransferase K; TG(K); TGase K; TGase-1; TGK; transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase); transglutaminase 1 K polypeptide; transglutaminase 1, K polypeptide; transglutaminase K; transglutaminase-1
Orthologs:
Homo sapiens (human) : TGM1 (transglutaminase 1)  HGNC  Alliance
Mus musculus (house mouse) : Tgm1 (transglutaminase 1, K polypeptide)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : TGM1 (transglutaminase 1)
Canis lupus familiaris (dog) : TGM1 (transglutaminase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tgm1 (transglutaminase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01534,378,136 - 34,393,150 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01538,268,112 - 38,282,132 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41533,846,367 - 33,859,615 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11533,862,066 - 33,875,315 (-)NCBI
Celera1528,767,463 - 28,780,710 (-)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tgm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61838
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2018-04-10
Status: ACTIVE