Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:3'-5' DNA helicase activity
go back to main search page
Accession:GO:0043138 term browser browse the term
Definition:Unwinding a DNA helix in the direction 5' to 3', driven by ATP hydrolysis.
Synonyms:exact_synonym: 3' to 5' DNA helicase activity;   ATP-dependent 3' to 5' DNA helicase activity;   ATP-dependent 3'-5' DNA helicase activity
 alt_id: GO:0043140
 xref: EC:5.6.2.4;   Reactome:R-HSA-167097 "HIV Promoter Opening: First Transition";   Reactome:R-HSA-174438 "Formation of the Flap Intermediate on the C-strand";   Reactome:R-HSA-75949 "RNA Polymerase II Promoter Opening: First Transition";   Reactome:R-HSA-9613490 "Unwinding of DNA for the nascent HIV-1 transcript: Second Transition";   Reactome:R-HSA-9613494 "Unwinding of DNA for the Nascent Transcript: Second Transition";   Reactome:R-HSA-9613497 "Unwinding DNA for the nascent transcript";   Reactome:R-HSA-9613498 "Unwinding of DNA for the nascent HIV-1 transcript";   Reactome:R-HSA-9684118 "ERCC3-facilitated RNA Pol II backtracking in TC-NER"


show annotations for term's descendants           Sort by:
3'-5' DNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCC3 activating signal cointegrator 1 complex subunit 3 enables IEA Ensembl GO_REF:0000107 NCBI chr12:58,590,888...58,932,677
Ensembl chr12:58,592,025...58,932,615 		JBrowse link
G BLM BLM RecQ like helicase enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:53,408,120...53,506,728
Ensembl chr 3:53,408,217...53,473,146 		JBrowse link
G DHX9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit enables IEA Ensembl GO_REF:0000107 NCBI chr19:23,310,911...23,344,083
Ensembl chr19:23,310,986...23,337,683 		JBrowse link
G FANCM FA complementation group M enables IEA InterPro GO_REF:0000002 NCBI chr 8:22,561,862...22,625,077
Ensembl chr 8:22,562,147...22,623,994 		JBrowse link
G FBH1 F-box DNA helicase 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G NAV2 neuron navigator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr21:41,458,280...42,181,227
Ensembl chr21:41,458,984...42,177,813 		JBrowse link
G RECQL RecQ like helicase enables IEA Ensembl GO_REF:0000107 NCBI chr27:25,590,326...25,636,304
Ensembl chr27:25,590,831...25,636,685 		JBrowse link
G RECQL4 RecQ like helicase 4 NOT|enables ISO (PMID:19177149) GO_Central PMID:19177149 NCBI chr13:37,930,906...37,936,653
Ensembl chr13:37,930,621...37,936,753 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 ISO RGD PMID:10336418 RGD:729809 NCBI chr20:2,095,807...2,137,528
Ensembl chr20:2,095,786...2,137,579 		JBrowse link
G WRN WRN RecQ like helicase enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625 		JBrowse link
single-stranded 3'-5' DNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G FBH1 F-box DNA helicase 1 enables IEA UniProt GO_REF:0000003 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696 		JBrowse link
G HELQ helicase, POLQ like enables ISO (PMID:11751861), (PMID:34316696), (PMID:34937945) FlyBase PMID:11751861 PMID:34316696 PMID:34937945 NCBI chr32:7,245,867...7,290,138
Ensembl chr32:7,245,230...7,290,014 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18607
    ATP-dependent activity 597
      helicase activity 161
        DNA helicase activity 53
          3'-5' DNA helicase activity 12
            single-stranded 3'-5' DNA helicase activity 3
Path 2
Term Annotations click to browse term
  molecular_function 18607
    catalytic activity 5535
      catalytic activity, acting on a nucleic acid 585
        catalytic activity, acting on DNA 215
          ATP-dependent activity, acting on DNA 104
            DNA helicase activity 53
              3'-5' DNA helicase activity 12
                single-stranded 3'-5' DNA helicase activity 3
paths to the root