Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:arachidonate metabolic process
go back to main search page
Accession:GO:0019369 term browser browse the term
Definition:The chemical reactions and pathways involving arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.
Synonyms:exact_synonym: arachidonic acid metabolic process;   arachidonic acid metabolism
 xref: Wikipedia:Arachidonic_acid

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
arachidonate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,542,966...9,555,235
Ensembl chrNW_004624786:9,542,970...9,555,214 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISO PMID:23382512
(PMID:15629692)
(PMID:10100631), (PMID:11256953)
(PMID:16129665)		 UniProt PMID:10100631 PMID:11256953 PMID:15629692 PMID:16129665 PMID:23382512 RGD:8554649 NCBI chrNW_004624786:10,647,450...10,659,301
Ensembl chrNW_004624786:10,647,175...10,659,337 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in ISO PMID:23382512
(PMID:17045234)
(PMID:12881489), (PMID:17045234)		 UniProt PMID:12881489 PMID:17045234 PMID:23382512 RGD:8554649 NCBI chrNW_004624786:10,666,255...10,689,204
Ensembl chrNW_004624786:10,666,423...10,688,376 		JBrowse link
G Dagla diacylglycerol lipase alpha acts_upstream_of
involved_in		 ISO
IEA		 (PMID:20147530) MGI
TreeGrafter		 PMID:20147530 GO_REF:0000118 NCBI chrNW_004624926:638,432...680,726
Ensembl chrNW_004624926:638,259...656,953 		JBrowse link
G Daglb diacylglycerol lipase beta acts_upstream_of
involved_in		 ISO
IEA		 (PMID:20147530) MGI
TreeGrafter		 PMID:20147530 GO_REF:0000118 NCBI chrNW_004624740:30,880,252...30,912,257
Ensembl chrNW_004624740:30,880,253...30,909,448 		JBrowse link
G Ephx1 epoxide hydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624835:6,161,930...6,181,016
Ensembl chrNW_004624835:6,162,111...6,168,714 		JBrowse link
G Fads1 fatty acid desaturase 1 ISO RGD PMID:11414679 RGD:632758 NCBI chrNW_004624926:594,421...607,654
Ensembl chrNW_004624926:598,922...606,611 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO (PMID:11115402)
(PMID:9195979)		 UniProt PMID:9195979 PMID:11115402 NCBI chrNW_004624730:3,313,773...3,314,870
Ensembl chrNW_004624730:3,313,972...3,314,626 		JBrowse link
G Gpx4 glutathione peroxidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:7,534,251...7,536,675
Ensembl chrNW_004624828:7,534,449...7,536,586 		JBrowse link
G LOC101696402 leukotriene-B4 omega-hydroxylase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624901:2,649,463...2,674,089
Ensembl chrNW_004624901:2,649,438...2,674,602 		JBrowse link
G LOC101696405 cytochrome P450 4A4-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624906:2,783,788...2,795,480 JBrowse link
G LOC101697745 leukotriene-B4 omega-hydroxylase 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624901:2,696,827...2,708,803 JBrowse link
G LOC101701066 cytochrome P450 1B1 involved_in ISO (PMID:15258110) UniProt PMID:15258110 NCBI chrNW_004624738:19,639,215...19,647,807
Ensembl chrNW_004624738:19,638,456...19,647,497 		JBrowse link
G LOC101708592 cytochrome P450 2C55 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:6,040,817...6,100,509
Ensembl chrNW_004624737:6,040,202...6,102,086 		JBrowse link
G LOC101722985 cytochrome P450 2D6-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:6,555,442...6,559,294 JBrowse link
G LOC101723802 cytochrome P450 2D17-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:6,585,381...6,594,437 JBrowse link
G LOC101724171 cytochrome P450 2D16 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:6,567,617...6,577,447 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO RGD PMID:15027896 RGD:1626220 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Mgll monoglyceride lipase involved_in ISO (PMID:20729846) UniProt PMID:20729846 NCBI chrNW_004624974:85,513...169,904
Ensembl chrNW_004624974:87,600...170,228 		JBrowse link
G Pla2g2f phospholipase A2 group IIF involved_in ISO (PMID:11877435) UniProt PMID:11877435 NCBI chrNW_004624764:5,243,507...5,249,842
Ensembl chrNW_004624764:5,244,152...5,249,842 		JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (PMID:7794891) RGD
UniProt		 PMID:7794891 PMID:16603549 RGD:1642459 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286 		JBrowse link
G Pnpla8 patatin like phospholipase domain containing 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:21,252,812...21,305,118
Ensembl chrNW_004624739:21,260,117...21,289,195 		JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chrNW_004624734:8,545,707...8,549,846
Ensembl chrNW_004624734:8,548,356...8,549,414 		JBrowse link
G LOC101701770 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:28973536) MGI PMID:28973536 NCBI chrNW_004624786:13,038,384...13,053,250
Ensembl chrNW_004624786:13,036,426...13,053,210 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:12,917,244...12,937,858
Ensembl chrNW_004624760:12,915,206...12,937,824 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1419907) Ensembl
TreeGrafter
MGI		 PMID:1419907 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
G Sphk1 sphingosine kinase 1 ISO RGD PMID:18723875 RGD:2311353 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
epoxygenase P450 pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101700677 cytochrome P450 2S1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:57,749...67,274
Ensembl chrNW_004624907:57,276...67,275 		JBrowse link
G LOC101706775 cytochrome P450 2A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:821,976...828,733 JBrowse link
G LOC101707867 cytochrome P450 2A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:845,941...852,669 JBrowse link
G LOC101708686 cytochrome P450 2A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:899,729...908,122 JBrowse link
G LOC101710356 cytochrome P450 2G1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:916,766...929,507 JBrowse link
G LOC101712634 cytochrome P450 2B4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:1,117,935...1,144,465 JBrowse link
G LOC101713256 cytochrome P450 2B4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:966,806...994,941 JBrowse link
G LOC101722366 cytochrome P450 2E1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:12,335,733...12,345,278
Ensembl chrNW_004624737:12,335,681...12,345,514 		JBrowse link
omega-hydroxylase P450 pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO RGD PMID:19889059 RGD:401794453 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973 		JBrowse link
G LOC101708291 cytochrome P450 2U1 involved_in ISO (PMID:24563460) UniProt PMID:24563460 NCBI chrNW_004624830:1,470,186...1,485,804
Ensembl chrNW_004624830:1,469,868...1,485,804 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15113
    cellular process 14725
      metabolic process 9391
        olefinic compound metabolic process 108
          arachidonate metabolic process 37
            cyclooxygenase pathway 5
            epoxygenase P450 pathway 8
            omega-hydroxylase P450 pathway 2
Path 2
Term Annotations click to browse term
  biological_process 15113
    cellular process 14725
      metabolic process 9391
        small molecule metabolic process 1537
          organic acid metabolic process 812
            oxoacid metabolic process 803
              carboxylic acid metabolic process 791
                monocarboxylic acid metabolic process 547
                  fatty acid metabolic process 348
                    unsaturated fatty acid metabolic process 88
                      arachidonate metabolic process 37
                        cyclooxygenase pathway 5
                        epoxygenase P450 pathway 8
                        omega-hydroxylase P450 pathway 2
paths to the root