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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:vulvitis
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Accession:DOID:3901 term browser browse the term
Definition:A vulvar disease that is characterized by inflammation of the vulva. (DO)
Synonyms:exact_synonym: vulvitides
 primary_id: MESH:D014847
 xref: EFO:1001239;   ICD10CM:N76.2
For additional species annotation, visit the Alliance of Genome Resources.


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Vulvar Vestibulitis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1b interleukin 1 beta ISO RGD PMID:9015038 RGD:7394738 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Tnf tumor necrosis factor ISO protein:increased expression:vagina RGD PMID:9015038 RGD:7394738 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
vulvovaginal candidiasis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl8 C-X-C motif chemokine ligand 8 ISO associated with human immunodeficiency virus infectious disease;protein:increased expression:vaginal fluid (human) RGD PMID:18243333 RGD:150523783 NCBI chrNW_004624730:1,744,097...1,747,206
Ensembl chrNW_004624730:1,743,916...1,747,293
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 ISO RGD PMID:23853597 RGD:39938863 NCBI chrNW_004624780:3,684,941...3,697,506
Ensembl chrNW_004624780:3,685,069...3,697,474
JBrowse link
G Ltf lactotransferrin ISO CTD Direct Evidence: therapeutic CTD PMID:16640825 NCBI chrNW_004624730:74,636,554...74,656,817
Ensembl chrNW_004624730:74,636,522...74,656,886
JBrowse link
G Mbl2 mannose binding lectin 2 ISO DNA:SNP:cds: RGD PMID:17470593 RGD:8693700 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14208
    disease of anatomical entity 13924
      reproductive system disease 2877
        female reproductive system disease 1973
          vulvar disease 24
            vulvitis 6
              Vulvar Vestibulitis + 2
              vulvovaginitis + 4
Path 2
Term Annotations click to browse term
  disease 14208
    disease of anatomical entity 13924
      Urogenital Diseases 4514
        Female Urogenital Diseases and Pregnancy Complications 2374
          Female Urogenital Diseases 1976
            female reproductive system disease 1973
              vulvar disease 24
                vulvitis 6
                  Vulvar Vestibulitis + 2
                  vulvovaginitis + 4
paths to the root