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picrocrocin - Ontology Report - Rat Genome Database

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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:picrocrocin
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Accession:CHEBI:53168 term browser browse the term
Definition:A beta-D-glucoside of beta-cyclocitral; the precursor of safranal. It is the compound most responsible for the bitter taste of saffron.
Synonyms:exact_synonym: (1R)-4-formyl-3,5,5-trimethylcyclohex-3-en-1-yl beta-D-glucopyranoside
 related_synonym: (R)-4-(beta-D-Glucopyranosyloxy)-2,6,6-trimethyl-1-cyclohexene-1-carboxaldehyde;   Formula=C16H26O7;   InChI=1S/C16H26O7/c1-8-4-9(5-16(2,3)10(8)6-17)22-15-14(21)13(20)12(19)11(7-18)23-15/h6,9,11-15,18-21H,4-5,7H2,1-3H3/t9-,11-,12-,13+,14-,15-/m1/s1;   InChIKey=WMHJCSAICLADIN-WYWSWGBSSA-N;   SMILES=CC1=C(C=O)C(C)(C)C[C@@H](C1)O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O
 xref: Beilstein:37745;   CAS:138-55-6;   KEGG:C17055
 xref_mesh: MESH:C087962
 xref: PMID:12509521

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picrocrocin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPA1 transient receptor potential cation channel subfamily A member 1 multiple interactions
increases activity		 EXP 2-(1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide inhibits the reaction [picrocrocin results in increased activity of TRPA1 protein] CTD PMID:30636360 NCBI chr 8:72,021,250...72,090,010
Ensembl chr 8:72,019,917...72,075,584 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 26506
    role 26329
      biological role 26308
        epitope 7439
          beta-D-glucose 1712
            beta-D-glucoside 1521
              picrocrocin 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 26506
    subatomic particle 26482
      composite particle 26482
        hadron 26482
          baryon 26482
            nucleon 26482
              atomic nucleus 26482
                atom 26482
                  main group element atom 26220
                    p-block element atom 26220
                      carbon group element atom 25665
                        carbon atom 25627
                          organic molecular entity 25627
                            heteroorganic entity 25013
                              organochalcogen compound 24607
                                organooxygen compound 24203
                                  carbohydrates and carbohydrate derivatives 16827
                                    carbohydrate 16827
                                      monosaccharide 5081
                                        aldose 3369
                                          aldohexose 2993
                                            glucose 2946
                                              D-glucose 2944
                                                D-glucopyranose 1865
                                                  beta-D-glucose 1712
                                                    beta-D-glucoside 1521
                                                      picrocrocin 1
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