Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:methyl vanillate
go back to main search page
Accession:CHEBI:46477 term browser browse the term
Definition:A benzoate ester that is the methyl ester of vanillic acid.
Synonyms:exact_synonym: methyl 4-hydroxy-3-methoxybenzoate
 related_synonym: 4-Hydroxy-3-methoxybenzoic acid methyl ester;   Formula=C9H10O4;   InChI=1S/C9H10O4/c1-12-8-5-6(9(11)13-2)3-4-7(8)10/h3-5,10H,1-2H3;   InChIKey=BVWTXUYLKBHMOX-UHFFFAOYSA-N;   Methyl 3-methoxy-4-hydroxybenzoate;   Methyl Vanillic Acid;   SMILES=COC(=O)c1ccc(O)c(OC)c1;   VANILLATE;   Vanillic acid, methyl ester
 xref: Beilstein:1369113;   CAS:3943-74-6
 xref_mesh: MESH:C000618837
 xref: PDBeChem:VXX;   PMID:22313772;   Reaxys:1369113


show annotations for term's descendants           Sort by:
methyl vanillate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 increases expression ISO methyl vanillate results in increased expression of DUOX2 mRNA CTD PMID:35523312 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902 		JBrowse link
G Nox4 NADPH oxidase 4 decreases expression ISO methyl vanillate results in decreased expression of NOX4 mRNA CTD PMID:35523312 NCBI chr 1:140,900,886...141,078,844
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19841
    role 19817
      chemical role 19451
        antioxidant 16140
          methyl vanillate 2
            methyl 4-acetoxy-3-methoxybenzoate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19841
    subatomic particle 19839
      composite particle 19839
        hadron 19839
          baryon 19839
            nucleon 19839
              atomic nucleus 19839
                atom 19839
                  main group element atom 19789
                    p-block element atom 19789
                      carbon group element atom 19737
                        carbon atom 19733
                          organic molecular entity 19733
                            heteroorganic entity 19492
                              organochalcogen compound 19255
                                organooxygen compound 19172
                                  carbon oxoacid 18641
                                    carboxylic acid 18638
                                      aromatic carboxylic acid 12618
                                        benzoic acids 12595
                                          benzoic acid 5331
                                            hydroxybenzoic acid 4797
                                              monohydroxybenzoic acid 2613
                                                vanillic acid 41
                                                  methyl vanillate 2
                                                    methyl 4-acetoxy-3-methoxybenzoate 0
paths to the root