.
petunidin 3-O-beta-D-glucoside - Ontology Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:petunidin 3-O-beta-D-glucoside
go back to main search page
Accession:CHEBI:31985 term browser browse the term
Definition:An anthocyanin cation that is petunidin substituted at position 3 by a beta-D-glucosyl residue
Synonyms:exact_synonym: 2-(3,4-dihydroxy-5-methoxyphenyl)-5,7-dihydroxychromenium-3-yl beta-D-glucopyranoside
 related_synonym: Formula=C22H23O12;   InChI=1S/C22H22O12/c1-31-14-3-8(2-12(26)17(14)27)21-15(6-10-11(25)4-9(24)5-13(10)32-21)33-22-20(30)19(29)18(28)16(7-23)34-22/h2-6,16,18-20,22-23,28-30H,7H2,1H3,(H3-,24,25,26,27)/p+1/t16-,18-,19+,20-,22-/m1/s1;   InChIKey=CCQDWIRWKWIUKK-QKYBYQKWSA-O;   Petunidin 3-O-beta-D-glucopyranoside;   Petunidin 3-glucoside;   SMILES=COc1cc(cc(O)c1O)-c1[o+]c2cc(O)cc(O)c2cc1O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O
 xref: CAS:6988-81-4;   HMDB:HMDB0038097;   KEGG:C12139;   KNApSAcK:C00006722;   LIPID_MAPS_instance:LMPK12010349
 xref_mesh: MESH:C455107
 xref: Reaxys:1613022;   Wikipedia:Petunidin-3-O-glucoside

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y

show annotations for term's descendants           Sort by:
petunidin 3-O-beta-D-glucoside term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP3 aquaporin 3 (Gill blood group) multiple interactions EXP [malvidin-3-glucoside co-treated with petunidin-3-glucoside] results in increased expression of AQP3 mRNA CTD PMID:33294640 NCBI chr 9:33,441,160...33,447,593
Ensembl chr 9:33,441,156...33,447,596 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 26506
    role 26329
      chemical role 24364
        antioxidant 17558
          petunidin 3-O-beta-D-glucoside 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 26506
    subatomic particle 26482
      composite particle 26482
        hadron 26482
          baryon 26482
            nucleon 26482
              atomic nucleus 26482
                atom 26482
                  main group element atom 26220
                    p-block element atom 26220
                      carbon group element atom 25665
                        carbon atom 25627
                          organic molecular entity 25627
                            organic molecule 25371
                              organic cyclic compound 24429
                                organic heterocyclic compound 22431
                                  oxacycle 20192
                                    benzopyran 12773
                                      1-benzopyran 12512
                                        chromenes 4796
                                          chromene 155
                                            2H-chromene 155
                                              chromenyliums 155
                                                chromenylium 155
                                                  flavylium 155
                                                    anthocyanidin cation 155
                                                      5-hydroxyanthocyanidin 112
                                                        petunidin 1
                                                          petunidin 3-O-beta-D-glucoside 1
paths to the root