D3Rat148 Marker Search Result - Rat Genome Database

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Marker: D3Rat148

Symbol: D3Rat148
Previously known as: R0093-A10; oxsts10690; 
RGD ID: 40752
Expected Size: 200 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.03146,426,801 - 146,427,014NCBIRnor6.0
Rnor_5.03152,786,076 - 152,786,289UniSTSRnor5.0
RGSC_v3.43141,265,470 - 141,265,676RGDRGSC3.4
RGSC_v3.43141,265,471 - 141,265,676UniSTSRGSC3.4
RGSC_v3.13141,171,043 - 141,171,249RGD
Celera3138,219,122 - 138,219,291UniSTS
SHRSP x BN Map365.2999UniSTS
SHRSP x BN Map365.2999RGD
Cytogenetic Map3q41UniSTS
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
Genes:   Acss1  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTGAGCCTGGGAAGTCTCTG
Reverse Primer CTGAGTGCTGAAACAAAGCG
 
Template 
TNGGNCAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCCCTGAGTGCTGAAA
CAAAGCGGGTGGGTGGGCAAGAGGATACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGAGAGAGAGAGAGAGAGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAAAGAGAAAGTACCCCACTCAGACACCCTGGAAACAGAGACTTCCCAGGCTCAGCCAGC
AGCTGAATATATCATGACTTCCTATNACTNAATGGGGGTACCGCNCTCGCATTCGTACTCATGG
TCATNGACTGTTTCCTGTGTGAAATTGTTCTGCGCTCACAATTCCACACAACATACGAGCCGGA
AGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTCACTCACATCTACATNGCGTNGCG
CTCACTGCCCNCTTTC

Region

Nucleotide Sequences
GenBank Nucleotide JH614341.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 296259 UniSTS
UniSTS 227556 UniSTS