Ednra (endothelin receptor type A) - Rat Genome Database

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Gene: Ednra (endothelin receptor type A) Rattus norvegicus
Analyze
Symbol: Ednra
Name: endothelin receptor type A
RGD ID: 2535
Description: Enables endothelin receptor activity. Involved in several processes, including cellular response to mechanical stimulus; glomerular filtration; and maternal process involved in parturition. Located in T-tubule and nuclear membrane. Used to study hypertension; myocardial infarction; portal hypertension; pulmonary emphysema; and pulmonary hypertension. Biomarker of several diseases, including hyperhomocysteinemia; impotence; obstructive sleep apnea; renal fibrosis; and type 2 diabetes mellitus. Human ortholog(s) of this gene implicated in hypertension (multiple); lung disease; mandibulofacial dysostosis with alopecia; migraine; and obstructive sleep apnea. Orthologous to human EDNRA (endothelin receptor type A); PARTICIPATES IN endothelin signaling pathway; inflammatory response pathway; Rho/Rac/Cdc42 mediated signaling pathway; INTERACTS WITH (R)-noradrenaline; 11-deoxycorticosterone; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ENDOR; endothelin A receptor; endothelin-1 receptor; endothelin-1 receptor-like; ET-A; ET-AR; Eta; LOC100366209; RATENDOR; RGD1559432
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Is Marker For: QTLs:   Scl12  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81947,137,360 - 47,207,961 (+)NCBIGRCr8
mRatBN7.21930,233,540 - 30,303,727 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1930,233,571 - 30,297,049 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1937,065,939 - 37,130,121 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01937,719,814 - 37,783,991 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01939,968,901 - 40,033,091 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01933,928,356 - 33,991,703 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1933,928,356 - 33,991,703 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01944,812,252 - 44,874,904 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41932,042,366 - 32,108,153 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11932,051,058 - 32,110,066 (+)NCBI
Celera1929,719,589 - 29,778,843 (+)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
EdnraRatAcute Experimental Pancreatitis treatmentIMP 1581841 RGD 
EdnraRatasthma  ISOEdnra (Mus musculus)4892322 RGD 
EdnraRatasthma  ISOEdnra (Mus musculus)4892288 RGD 
EdnraRatCardiovascular Abnormalities  ISOEdnra (Mus musculus)734910 RGD 
EdnraRatDiabetic Nephropathies  IMP 4892326associated with Diabetes Mellitus and ExperimentalRGD 
EdnraRatExperimental Diabetes Mellitus  IMP 4892336 RGD 
EdnraRathyperhomocysteinemia  IEP 4892572 RGD 
EdnraRathypertension  ISOEDNRA (Homo sapiens)1580950 RGD 
EdnraRathypertension  IDA 1581830 RGD 
EdnraRathypertension  IEP 4892284associated with UremiaRGD 
EdnraRatimpotence  IEP 2292142 RGD 
EdnraRatInflammation  ISOEdnra (Mus musculus)4892288 RGD 
EdnraRatlung disease severityISOEDNRA (Homo sapiens)4892286associated with Cystic FibrosisRGD 
EdnraRatmigraine  ISOEDNRA (Homo sapiens)734916DNA:polymorphism:-231A>GRGD 
EdnraRatmyocardial infarction  IDA 1580948 RGD 
EdnraRatMyocardial Ischemia  ISOEDNRA (Homo sapiens)1580946 RGD 
EdnraRatMyocardial Reperfusion Injury  IMP 4892580 RGD 
EdnraRatNeoplasm Metastasis  ISOEdnra (Mus musculus)4892282associated with Bladder NeoplasmsRGD 
EdnraRatnephrotic syndrome  IEP 7244242mRNA:increased expression:GlomerulusRGD 
EdnraRatobstructive sleep apnea  IEP 4145067 RGD 
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Object Symbol
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Original Reference(s)
EdnraRatgenetic disease  ISOEDNRA (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
EdnraRatmandibulofacial dysostosis with alopecia  ISOEDNRA (Homo sapiens)8554872ClinVar Annotator: match by term: Mandibulofacial dysostosis with alopeciaClinVarPMID:16116593 more ...
EdnraRatmethylmalonic acidemia cblA type  ISOEDNRA (Homo sapiens)8554872ClinVar Annotator: match by term: Methylmalonic aciduria and cblA typeClinVarPMID:15523652 more ...
EdnraRatmigraine  ISOEDNRA (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11376172 more ...
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Original Reference(s)
EdnraRatcongenital heart disease  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9811577
EdnraRatcongestive heart failure  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:28095452
EdnraRatCraniofacial Abnormalities  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9811577 and PMID:17294360
EdnraRatDiaphragmatic Hernia  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9473106 and PMID:10693666
EdnraRatDisease Progression  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25194819
EdnraRathypertension  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:12600921
EdnraRatimpotence  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18823320
EdnraRatNasopharyngeal Neoplasms  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17032313
EdnraRatobstructive sleep apnea  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20083432
EdnraRatOvarian Neoplasms  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25194819
EdnraRatStroke  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29531354
EdnraRattype 2 diabetes mellitus  ISOEDNRA (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16387788
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Original Reference(s)
EdnraRatmandibulofacial dysostosis with alopecia  ISSEdnra (Mus musculus)13592920OMIM:616367MouseDO 
EdnraRatvelocardiofacial syndrome  ISSEdnra (Mus musculus)13592920OMIM:192430MouseDO 
Object Symbol
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Original Reference(s)
EdnraRatmandibulofacial dysostosis with alopecia  ISOEDNRA (Homo sapiens)7240710 OMIM 
EdnraRatmigraine  ISOEDNRA (Homo sapiens)7240710 OMIM 

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Original Reference(s)
EdnraRat(R)-noradrenaline multiple interactionsEXP 6480464[cyclo(Trp-Asp-Pro-Val-Leu) binds to and results in decreased activity of EDNRA protein] which results in decreased susceptibility to NorepinephrineCTDPMID:15834289
EdnraRat(S)-nicotine decreases expressionISOEDNRA (Homo sapiens)6480464Nicotine results in decreased expression of EDNRA mRNACTDPMID:18247414
EdnraRat1,2-dimethylhydrazine multiple interactionsISOEdnra (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of EDNRA mRNACTDPMID:22206623
EdnraRat1,2-dimethylhydrazine increases expressionISOEdnra (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of EDNRA mRNACTDPMID:22206623
EdnraRat11-deoxycorticosterone multiple interactionsEXP 6480464[5-(dimethylamino)-N-(3 more ...CTDPMID:16271043 and PMID:22431579
EdnraRat11-deoxycorticosterone affects response to substanceEXP 6480464EDNRA protein affects the susceptibility to DesoxycorticosteroneCTDPMID:12600921
EdnraRat17beta-estradiol increases expressionISOEDNRA (Homo sapiens)6480464Estradiol results in increased expression of EDNRA mRNACTDPMID:19943105
EdnraRat17beta-estradiol increases expressionISOEdnra (Mus musculus)6480464Estradiol results in increased expression of EDNRA mRNACTDPMID:39298647
EdnraRat17beta-estradiol multiple interactionsISOEDNRA (Homo sapiens)6480464Tamoxifen inhibits the reaction [Estradiol results in increased expression of EDNRA mRNA]CTDPMID:19943105
EdnraRat2,2',4,4'-Tetrabromodiphenyl ether increases expressionEXP 64804642 more ...CTDPMID:27291303
EdnraRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOEdnra (Mus musculus)6480464[TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in decreased expression of EDNRA mRNACTDPMID:25975270
EdnraRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of EDNRA mRNACTDPMID:34747641
EdnraRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of EDNRA mRNACTDPMID:32109520
EdnraRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOEdnra (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of EDNRA mRNACTDPMID:26290441
EdnraRat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOEdnra (Mus musculus)64804642 more ...CTDPMID:38648751
EdnraRat2-naphthylamine decreases expressionISOEDNRA (Homo sapiens)64804642-Naphthylamine results in decreased expression of EDNRA mRNACTDPMID:18247414
EdnraRat3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine increases expressionEXP 6480464Puromycin Aminonucleoside results in increased expression of EDNRA mRNACTDPMID:12972712
EdnraRat4,4'-sulfonyldiphenol increases expressionISOEdnra (Mus musculus)6480464bisphenol S results in increased expression of EDNRA mRNACTDPMID:30951980
EdnraRat4,4'-sulfonyldiphenol decreases methylationISOEDNRA (Homo sapiens)6480464bisphenol S results in decreased methylation of EDNRA geneCTDPMID:31601247
EdnraRat4,4'-sulfonyldiphenol affects expressionISOEdnra (Mus musculus)6480464bisphenol S affects the expression of EDNRA mRNACTDPMID:39298647

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Biological Process
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Original Reference(s)
EdnraRatadenylate cyclase-inhibiting G protein-coupled receptor signaling pathway acts_upstream_of_or_withinIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRatadenylate cyclase-inhibiting G protein-coupled receptor signaling pathway acts_upstream_of_or_withinISOEdnra (Mus musculus)1624291MGI:88121 PMID:15928212RGDPMID:15928212
EdnraRatangiogenesis involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRatangiogenesis involved_inISOEdnra (Mus musculus)1624291MGI:95284 PMID:24043815RGDPMID:24043815
EdnraRataorta development involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRataorta development involved_inISOEdnra (Mus musculus)1624291MGI:1857473 more ...RGDPMID:14585980 and PMID:31219639
EdnraRatartery smooth muscle contraction involved_inIEAUniProtKB:P25101 and ensembl:ENSP000004989691600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRatartery smooth muscle contraction involved_inISOEDNRA (Homo sapiens)1624291 PMID:8982507RGDPMID:8982507
EdnraRatatrial cardiac muscle tissue development involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRatatrial cardiac muscle tissue development involved_inISOEdnra (Mus musculus)1624291MGI:3773698 more ...RGDPMID:20929948
EdnraRataxon extension involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRataxon extension involved_inISOEdnra (Mus musculus)1624291 PMID:18401410RGDPMID:18401410
EdnraRataxon guidance involved_inISOEdnra (Mus musculus)1624291MGI:1857473 more ...RGDPMID:18401410 and PMID:30735130
EdnraRataxon guidance involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRataxonogenesis involved in innervation involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRataxonogenesis involved in innervation involved_inISOEdnra (Mus musculus)1624291MGI:1857473 more ...RGDPMID:24875861 and PMID:30735130
EdnraRatblood circulation involved_inIEAARBA:ARBA000290441600115GO_REF:0000117UniProtGO_REF:0000117
EdnraRatblood vessel remodeling involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRatblood vessel remodeling involved_inISOEdnra (Mus musculus)1624291MGI:2687362 PMID:25197047RGDPMID:25197047
EdnraRatbranching involved in blood vessel morphogenesis involved_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
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Cellular Component
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Original Reference(s)
EdnraRatmembrane located_inIEAInterPro:IPR000276 more ...1600115GO_REF:0000002InterProGO_REF:0000002
EdnraRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
EdnraRatnuclear membrane  IDA 1581838 RGD 
EdnraRatplasma membrane is_active_inISOEdnra (Mus musculus)1624291 PMID:30990108RGDPMID:30990108
EdnraRatplasma membrane is_active_inIEAUniProtKB:Q61614 and ensembl:ENSMUSP000000340291600115GO_REF:0000107EnsemblGO_REF:0000107
EdnraRatplasma membrane is_active_inIBAPANTHER:PTN002517505 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
EdnraRatplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
EdnraRatplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
EdnraRatT-tubule  IDA 1581834 RGD 
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Molecular Function
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RGD Manual Annotations


  
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Original Reference(s)
EdnraRatendothelin signaling pathway  IMP 4892591 RGD 
EdnraRatinflammatory response pathway  IMP 4892591 RGD 
EdnraRatRho/Rac/Cdc42 mediated signaling pathway  IMP 4892323 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
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Original Reference(s)
EdnraRatcalcium/calcium-mediated signaling pathway   IEA 6907045 KEGGrno:04020

Imported Annotations - PID (archival)

Object Symbol
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Original Reference(s)
EdnraRatendothelin signaling pathway  ISOEDNRA (Homo sapiens)6484113 PIDPID:200005
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Original Reference(s)
EdnraRatglomerulosclerosis  IDA 1581830 RGD 
EdnraRatheart left ventricle hypertrophy  IDA 1581830 RGD 
EdnraRatincreased systemic arterial systolic blood pressure  IDA 1581830 RGD 
EdnraRatkidney cyst  IMP 1581844 RGD 
EdnraRatrenal interstitial fibrosis  IMP 1581844 RGD 

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#
Reference Title
Reference Citation
1. Developmental changes in the functional, biochemical and molecular properties of rat bladder endothelin receptors. Afiatpour P, etal., Naunyn Schmiedebergs Arch Pharmacol. 2003 May;367(5):462-72. Epub 2003 Apr 17.
2. Inhibition of endothelin-1 receptors improves impaired nitric oxide synthase-dependent dilation of cerebral arterioles in type-1 diabetic rats. Arrick DM and Mayhan WG, Microcirculation. 2010 Aug;17(6):439-46.
3. ETA receptor-mediated Ca2+ signaling in thin descending limbs of Henle's loop: impairment in genetic hypertension. Bailey MA, etal., Kidney Int. 2003 Apr;63(4):1276-84.
4. Major role for hypoxia inducible factor-1 and the endothelin system in promoting myocardial infarction and hypertension in an animal model of obstructive sleep apnea. Belaidi E, etal., J Am Coll Cardiol. 2009 Apr 14;53(15):1309-17.
5. Association of EDNRA, but not WNK4 or FKBP1B, polymorphisms with essential hypertension. Benjafield AV, etal., Clin Genet. 2003 Nov;64(5):433-8.
6. Endothelin-1 receptor subtypes expression and binding in a perfused rat model of myocardial infarction. Bikhazi AB, etal., Comp Biochem Physiol C Toxicol Pharmacol. 2003 Jan;134(1):35-43.
7. Functional endothelin receptors are present on nuclei in cardiac ventricular myocytes. Boivin B, etal., J Biol Chem. 2003 Aug 1;278(31):29153-63. Epub 2003 May 19.
8. Genetic polymorphisms in endothelin-receptor-subtype-a-gene as susceptibility factor for obstructive sleep apnea syndrome. Buck D, etal., Sleep Med. 2010 Feb;11(2):213-7. Epub 2010 Jan 18.
9. Murine and rat cavernosal responses to endothelin-1 and urotensin-II Vasoactive Peptide Symposium. Carneiro FS, etal., J Am Soc Hypertens. 2008 Nov;2(6):439-447.
10. ETA receptor-mediated Ca2+ mobilisation in H9c2 cardiac cells. Ceccarelli F, etal., Biochem Pharmacol 2003 Mar 1;65(5):783-93.
11. Effects of chronic cold exposure on the endothelin system. Chen GF and Sun Z, J Appl Physiol. 2006 May;100(5):1719-26. Epub 2005 Dec 29.
12. Endothelin-1 receptor antagonists prevent the development of pulmonary emphysema in rats. Chen Y, etal., Eur Respir J. 2010 Apr;35(4):904-12. Epub 2009 Nov 6.
13. Endothelins as pronociceptive mediators of the rat trigeminal system: role of ETA and ETB receptors. Chichorro JG, etal., Brain Res. 2010 Jul 23;1345:73-83. Epub 2010 May 5.
14. Endothelin-1 impairs alveolar epithelial function via endothelial ETB receptor. Comellas AP, etal., Am J Respir Crit Care Med. 2009 Jan 15;179(2):113-22. Epub 2008 Oct 23.
15. Increased ET-1 and reduced ET(B) receptor expression in uremic hypertensive rats. D'Amours M, etal., Clin Exp Hypertens. 2010 Jan;32(1):61-9.
16. EDNRA variants associate with smooth muscle mRNA levels, cell proliferation rates, and cystic fibrosis pulmonary disease severity. Darrah R, etal., Physiol Genomics. 2010 Mar 3;41(1):71-7. Epub 2009 Dec 22.
17. Increased endothelin-1 reactivity and endothelial dysfunction in carotid arteries from rats with hyperhomocysteinemia. de Andrade CR, etal., Br J Pharmacol. 2009 Jun;157(4):568-80. Epub 2009 Apr 9.
18. Age-related changes in endothelin-1 receptor subtypes in rat heart. Del Ry S, etal., Exp Aging Res. 2008 Jul-Sep;34(3):251-66.
19. Upregulation of endothelin receptors A and B in the nitrofen induced hypoplastic lung occurs early in gestation. Dingemann J, etal., Pediatr Surg Int. 2010 Jan;26(1):65-9.
20. Enhanced expression of renal endothelin-converting enzyme-1 and endothelin-A-receptor mRNA in rats with interstitial fibrosis following ureter ligation. Feldman DL, etal., J Cardiovasc Pharmacol. 2000 Nov;36(5 Suppl 1):S255-9.
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PMID:1312429   PMID:8982507   PMID:9449664   PMID:9826706   PMID:10626068   PMID:11546805   PMID:11882629   PMID:11897624   PMID:11910302   PMID:12464391   PMID:12668144   PMID:12686728  
PMID:12851419   PMID:14993193   PMID:15306564   PMID:15327783   PMID:15344879   PMID:15563533   PMID:15585964   PMID:15664398   PMID:15668985   PMID:15838253   PMID:15838256   PMID:15838268  
PMID:15838271   PMID:15838315   PMID:15838319   PMID:15838321   PMID:15838330   PMID:15838346   PMID:15838359   PMID:15838360   PMID:15838361   PMID:15838363   PMID:15915003   PMID:15928212  
PMID:16463654   PMID:16712977   PMID:16736156   PMID:16763077   PMID:16947426   PMID:17060503   PMID:17312275   PMID:17333248   PMID:17379848   PMID:17400719   PMID:17495482   PMID:17626731  
PMID:17639881   PMID:17670915   PMID:17892519   PMID:18205269   PMID:18281380   PMID:18287215   PMID:18424628   PMID:18462720   PMID:18469849   PMID:18515645   PMID:18518881   PMID:18524860  
PMID:18567602   PMID:18823320   PMID:19029977   PMID:19104001   PMID:19157542   PMID:19628575   PMID:19748906   PMID:20307649   PMID:20450830   PMID:20628427   PMID:20844020   PMID:21801590  
PMID:21801594   PMID:21801595   PMID:22258095   PMID:22365956   PMID:22406300   PMID:22407503   PMID:22569294   PMID:22952915   PMID:23047940   PMID:23351051   PMID:23396520   PMID:23436727  
PMID:23946290   PMID:24144054   PMID:24157978   PMID:24449761   PMID:24486390   PMID:24582810   PMID:24636620   PMID:24815227   PMID:24918345   PMID:25088996   PMID:25091502   PMID:25255392  
PMID:25891848   PMID:26459423   PMID:26528589   PMID:26776836   PMID:27697218   PMID:27997891   PMID:28012855   PMID:28412414   PMID:28579512   PMID:28757442   PMID:29329779   PMID:29360807  
PMID:31075232   PMID:31398465   PMID:32023824   PMID:33098940   PMID:33127751   PMID:33339902   PMID:34894846   PMID:38166688  
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Ednra
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81947,137,360 - 47,207,961 (+)NCBIGRCr8
mRatBN7.21930,233,540 - 30,303,727 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1930,233,571 - 30,297,049 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1937,065,939 - 37,130,121 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01937,719,814 - 37,783,991 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01939,968,901 - 40,033,091 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01933,928,356 - 33,991,703 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1933,928,356 - 33,991,703 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01944,812,252 - 44,874,904 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41932,042,366 - 32,108,153 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11932,051,058 - 32,110,066 (+)NCBI
Celera1929,719,589 - 29,778,843 (+)NCBICelera
Cytogenetic Map19q11NCBI
EDNRA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384147,481,097 - 147,544,954 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4147,480,917 - 147,544,954 (+)EnsemblGRCh38hg38GRCh38
GRCh374148,402,249 - 148,466,106 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364148,621,575 - 148,685,555 (+)NCBINCBI36Build 36hg18NCBI36
Build 344148,759,734 - 148,823,710NCBI
Celera4145,723,204 - 145,787,202 (+)NCBICelera
Cytogenetic Map4q31.22-q31.23NCBI
HuRef4144,129,326 - 144,193,179 (+)NCBIHuRef
CHM1_14148,380,418 - 148,444,465 (+)NCBICHM1_1
T2T-CHM13v2.04150,805,228 - 150,869,037 (+)NCBIT2T-CHM13v2.0
Ednra
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39878,389,658 - 78,451,081 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl878,389,660 - 78,451,093 (-)EnsemblGRCm39 Ensembl
GRCm38877,663,029 - 77,724,452 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl877,663,031 - 77,724,464 (-)EnsemblGRCm38mm10GRCm38
MGSCv37880,186,928 - 80,248,351 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36880,559,140 - 80,620,420 (-)NCBIMGSCv36mm8
Celera881,946,457 - 82,007,225 (-)NCBICelera
Cytogenetic Map8C1NCBI
cM Map836.63NCBI
Ednra
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554283,062,303 - 3,114,761 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554283,062,303 - 3,114,761 (+)NCBIChiLan1.0ChiLan1.0
EDNRA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23145,349,200 - 145,415,071 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14145,714,744 - 145,780,615 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04139,815,336 - 139,879,600 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14151,476,353 - 151,536,497 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4151,476,356 - 151,536,497 (+)Ensemblpanpan1.1panPan2
EDNRA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11545,823,472 - 45,878,527 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1545,823,560 - 45,876,463 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1546,219,878 - 46,270,714 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01546,496,528 - 46,553,179 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1546,496,502 - 46,554,470 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11545,768,959 - 45,819,737 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01545,864,678 - 45,915,481 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01546,175,034 - 46,225,816 (+)NCBIUU_Cfam_GSD_1.0
Ednra
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530144,512,782 - 44,568,451 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365351,949,941 - 2,005,910 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365351,950,117 - 2,005,786 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EDNRA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl881,209,327 - 81,276,853 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1881,210,750 - 81,279,053 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2886,293,177 - 86,319,721 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EDNRA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1793,980,983 - 94,043,863 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl793,985,797 - 94,042,296 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603773,678,428 - 73,748,330 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ednra
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248536,302,751 - 6,360,089 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248536,298,406 - 6,362,353 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Ednra
529 total Variants

Predicted Target Of
Summary Value
Count of predictions:386
Count of miRNA genes:211
Interacting mature miRNAs:276
Transcripts:ENSRNOT00000058162
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 28 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61328Eae8Experimental allergic encephalomyelitis QTL 84nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)192481604133061905Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat

1 to 10 of 28 rows
D19Mco2  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01944,873,858 - 44,874,084NCBIRnor5.0
RGSC_v3.41932,107,108 - 32,107,333RGDRGSC3.4
RGSC_v3.11932,111,934 - 32,112,159RGD
Cytogenetic Map19q11UniSTS
RH127903  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21930,296,755 - 30,296,970 (+)MAPPERmRatBN7.2
Rnor_6.01933,991,410 - 33,991,624NCBIRnor6.0
Rnor_5.01944,874,611 - 44,874,825UniSTSRnor5.0
RGSC_v3.41932,107,860 - 32,108,074UniSTSRGSC3.4
Celera1929,778,550 - 29,778,764UniSTS
Cytogenetic Map19q11UniSTS
RH141089  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21930,295,676 - 30,295,891 (+)MAPPERmRatBN7.2
Rnor_6.01933,990,331 - 33,990,545NCBIRnor6.0
Rnor_5.01944,873,532 - 44,873,746UniSTSRnor5.0
RGSC_v3.41932,106,781 - 32,106,995UniSTSRGSC3.4
Celera1929,777,471 - 29,777,685UniSTS
RH 3.4 Map19231.2UniSTS
Cytogenetic Map19q11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000058162   ⟹   ENSRNOP00000054967
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1930,233,692 - 30,297,049 (+)Ensembl
Rnor_6.0 Ensembl1933,928,356 - 33,991,703 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000078395   ⟹   ENSRNOP00000072294
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1930,237,576 - 30,294,075 (+)Ensembl
Rnor_6.0 Ensembl1933,932,532 - 33,988,729 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000078701   ⟹   ENSRNOP00000069839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1930,237,576 - 30,294,075 (+)Ensembl
Rnor_6.0 Ensembl1933,932,532 - 33,988,729 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000080095   ⟹   ENSRNOP00000071866
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1933,931,719 - 33,988,877 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000080317   ⟹   ENSRNOP00000071667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1930,233,571 - 30,297,049 (+)Ensembl
Rnor_6.0 Ensembl1933,932,558 - 33,988,196 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000091985   ⟹   ENSRNOP00000073963
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1930,237,576 - 30,294,075 (+)Ensembl
Rnor_6.0 Ensembl1933,932,532 - 33,988,729 (+)Ensembl
RefSeq Acc Id: NM_012550   ⟹   NP_036682
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81947,137,924 - 47,201,285 (+)NCBI
mRatBN7.21930,233,692 - 30,297,049 (+)NCBI
Rnor_6.01933,928,356 - 33,991,703 (+)NCBI
Rnor_5.01944,812,252 - 44,874,904 (+)NCBI
RGSC_v3.41932,042,366 - 32,108,153 (+)RGD
Celera1929,719,589 - 29,778,843 (+)RGD
Sequence:
RefSeq Acc Id: XM_039097468   ⟹   XP_038953396
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81947,137,360 - 47,201,285 (+)NCBI
mRatBN7.21930,233,540 - 30,293,865 (+)NCBI
RefSeq Acc Id: XR_005496613
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81947,137,360 - 47,207,961 (+)NCBI
mRatBN7.21930,233,543 - 30,303,727 (+)NCBI
RefSeq Acc Id: NP_036682   ⟸   NM_012550
- Peptide Label: precursor
- UniProtKB: P26684 (UniProtKB/Swiss-Prot),   A0A0G2JSX5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071667   ⟸   ENSRNOT00000080317
Ensembl Acc Id: ENSRNOP00000071866   ⟸   ENSRNOT00000080095
Ensembl Acc Id: ENSRNOP00000072294   ⟸   ENSRNOT00000078395
Ensembl Acc Id: ENSRNOP00000054967   ⟸   ENSRNOT00000058162
Name Modeler Protein Id AA Range Protein Structure
AF-P26684-F1-model_v2 AlphaFold P26684 1-426 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 36 of 36 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-5916 BioCyc
Ensembl Genes ENSRNOG00000012721 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000058162 ENTREZGENE
  ENSRNOT00000058162.4 UniProtKB/TrEMBL
  ENSRNOT00000078395.2 UniProtKB/TrEMBL
  ENSRNOT00000078701.2 UniProtKB/TrEMBL
  ENSRNOT00000080317.2 UniProtKB/TrEMBL
  ENSRNOT00000091985.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Endthln_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ETA_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_endothelin_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:24326 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 24326 ENTREZGENE
PANTHER ENDOTHELIN-1 RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ednra PhenoGen
PRINTS ENDOTHELINAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENDOTHELINR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012721 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR TC215722
UniProt A0A0G2JSX5 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2K118_RAT UniProtKB/TrEMBL
  A1Y2B8 ENTREZGENE, UniProtKB/TrEMBL
  A1Y2R7_RAT UniProtKB/TrEMBL
  A1Y2R8_RAT UniProtKB/TrEMBL
  A1Y2R9_RAT UniProtKB/TrEMBL
  A6IYK2_RAT UniProtKB/TrEMBL
  EDNRA_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 36 of 36 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-03-29 Ednra  endothelin receptor type A  LOC100366209  endothelin-1 receptor-like  Data merged from RGD:2324049 737654 PROVISIONAL
2013-03-29 Ednra  endothelin receptor type A  RGD1559432  RGD1559432  Data merged from RGD:1559432 737654 PROVISIONAL
2010-05-06 LOC100366209  endothelin-1 receptor-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 RGD1559432  RGD1559432   RGD1559432_predicted  RGD1559432 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1559432_predicted  RGD1559432 (predicted)  LOC498937  LOC498937  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498937  LOC498937      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-06-10 Ednra  Endothelin receptor type A      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_expression expressed in vascular and nonvascular tissues 628459
gene_expression expressed in vascular and nonvascular tissues 628515
gene_expression expressed in vascular and nonvascular tissues 628516
gene_expression not expressed in Spontaneously hypertensive rat hearts but was expressed in salt-hypertensive sensitive and resistant rats fed a high-salt diet 1358986
gene_product member of the endothelian family 628516