Akap13 (A-kinase anchoring protein 13) - Rat Genome Database

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Gene: Akap13 (A-kinase anchoring protein 13) Rattus norvegicus
Analyze
Symbol: Akap13
Name: A-kinase anchoring protein 13
RGD ID: 727893
Description: Enables MAP-kinase scaffold activity. Involved in several processes, including adrenergic receptor signaling pathway; cell growth involved in cardiac muscle cell development; and positive regulation of intracellular signal transduction. Located in perinuclear region of cytoplasm. Orthologous to human AKAP13 (A-kinase anchoring protein 13); PARTICIPATES IN protein kinase A (PKA) signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A kinase (PRKA) anchor protein 13; A-kinase anchor protein 13; AKAP-13; AKAP-Lbc; LOC293024; protein kinase A anchoring protein Rt31
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81138,722,445 - 139,029,401 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)EnsemblGRCr8
mRatBN7.21129,313,183 - 129,619,647 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1137,232,876 - 137,538,333 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01144,403,105 - 144,708,592 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01137,289,702 - 137,597,080 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01137,089,558 - 137,315,272 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1137,014,272 - 137,315,272 (+)Ensemblrn6Rnor6.0
Rnor_5.01138,007,112 - 138,312,524 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41131,052,674 - 131,360,512 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1121,422,303 - 121,727,463 (+)NCBICelera
RGSC_v3.11131,302,912 - 131,380,987 (+)NCBI
Cytogenetic Map1q31NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
alpha-pinene  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-hexachlorocyclohexane  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
camptothecin  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
cobalt dichloride  (ISO)
colforsin daropate hydrochloride  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
fipronil  (EXP)
folic acid  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
gallic acid  (ISO)
gentamycin  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
hexadecanoic acid  (ISO)
inulin  (ISO)
iron atom  (EXP)
iron(0)  (EXP)
isoprenaline  (ISO)
methamphetamine  (ISO)
methidathion  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
rac-lactic acid  (ISO)
rotenone  (EXP)
selenium atom  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone enanthate  (ISO)
tetraphene  (ISO)
thiram  (ISO)
topotecan  (EXP)
triphenyl phosphate  (EXP,ISO)
triptonide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
versicolorin A  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. A-kinase anchoring proteins: from protein complexes to physiology and disease. Carnegie GK, etal., IUBMB Life. 2009 Apr;61(4):394-406.
2. AKAP-Lbc mobilizes a cardiac hypertrophy signaling pathway. Carnegie GK, etal., Mol Cell. 2008 Oct 24;32(2):169-79.
3. A-kinase-anchoring protein-Lbc anchors IkappaB kinase beta to support interleukin-6-mediated cardiomyocyte hypertrophy. del Vescovo CD, etal., Mol Cell Biol. 2013 Jan;33(1):14-27. doi: 10.1128/MCB.00887-12. Epub 2012 Oct 22.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Ht31: the first protein kinase A anchoring protein to integrate protein kinase A and Rho signaling. Klussmann E, etal., FEBS Lett 2001 Nov 2;507(3):264-8.
6. The Rho guanine nucleotide exchange factor AKAP13 (BRX) is essential for cardiac development in mice. Mayers CM, etal., J Biol Chem. 2010 Apr 16;285(16):12344-54. doi: 10.1074/jbc.M110.106856. Epub 2010 Feb 5.
7. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
8. A-kinase anchoring protein Lbc coordinates a p38 activating signaling complex controlling compensatory cardiac hypertrophy. Perez Lopez I, etal., Mol Cell Biol. 2013 Aug;33(15):2903-17. doi: 10.1128/MCB.00031-13. Epub 2013 May 28.
9. GOA pipeline RGD automated data pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Localized effects of cAMP mediated by distinct routes of protein kinase A. Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.
Additional References at PubMed
PMID:1731775   PMID:11546812   PMID:16469733   PMID:19946888   PMID:21224381   PMID:24269843   PMID:25186459   PMID:25892096  


Genomics

Comparative Map Data
Akap13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81138,722,445 - 139,029,401 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)EnsemblGRCr8
mRatBN7.21129,313,183 - 129,619,647 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1137,232,876 - 137,538,333 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01144,403,105 - 144,708,592 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01137,289,702 - 137,597,080 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01137,089,558 - 137,315,272 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1137,014,272 - 137,315,272 (+)Ensemblrn6Rnor6.0
Rnor_5.01138,007,112 - 138,312,524 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41131,052,674 - 131,360,512 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1121,422,303 - 121,727,463 (+)NCBICelera
RGSC_v3.11131,302,912 - 131,380,987 (+)NCBI
Cytogenetic Map1q31NCBI
AKAP13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381585,380,603 - 85,749,358 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1585,380,571 - 85,749,358 (+)Ensemblhg38GRCh38
GRCh371585,923,834 - 86,292,589 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361583,724,875 - 84,093,590 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341584,021,271 - 84,093,590NCBI
Celera1562,323,846 - 62,692,414 (+)NCBICelera
Cytogenetic Map15q25.3NCBI
HuRef1561,986,401 - 62,354,887 (+)NCBIHuRef
CHM1_11585,765,298 - 86,134,016 (+)NCBICHM1_1
T2T-CHM13v2.01583,132,647 - 83,501,376 (+)NCBIT2T-CHM13v2.0
Akap13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39775,105,271 - 75,404,357 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl775,105,282 - 75,404,357 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38775,455,526 - 75,754,609 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl775,455,534 - 75,754,609 (+)Ensemblmm10GRCm38
MGSCv37782,600,420 - 82,899,495 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36775,328,812 - 75,628,122 (+)NCBIMGSCv36mm8
Celera772,913,871 - 73,205,960 (+)NCBICelera
Cytogenetic Map7D1NCBI
cM Map743.76NCBI
Akap13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541619,009,485 - 19,247,626 (-)Ensembl
ChiLan1.0NW_00495541619,006,206 - 19,327,523 (-)NCBIChiLan1.0ChiLan1.0
AKAP13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21674,930,726 - 75,292,650 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11578,635,626 - 78,997,324 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01564,076,422 - 64,438,109 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11583,289,867 - 83,651,362 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1583,387,667 - 83,651,362 (+)EnsemblpanPan2panpan1.1
AKAP13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1349,076,313 - 49,310,564 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl349,076,642 - 49,308,221 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha351,631,494 - 51,952,108 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0349,413,000 - 49,733,699 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl349,412,925 - 49,729,970 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1348,911,383 - 49,227,381 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0349,139,636 - 49,460,216 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0349,485,435 - 49,806,458 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Akap13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640134,357,191 - 134,672,629 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648311,861,877 - 11,972,763 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648311,661,862 - 11,977,292 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1787,889,384 - 88,222,854 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2794,486,955 - 94,583,014 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1294,009,921 - 4,364,226 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl294,106,732 - 4,359,516 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605942,653,071 - 43,006,115 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akap13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476812,765,723 - 13,095,136 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476812,767,120 - 13,099,288 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Akap13
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12124,803,974 - 125,095,696 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Akap13
4799 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:496
Count of miRNA genes:250
Interacting mature miRNAs:297
Transcripts:ENSRNOT00000014802
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1131179947176179947Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)1137611478182611478Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1101228864146228864Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1130419227175419227Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1132760429191848948Rat
631684Bp117Blood pressure QTL 1178.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1120082258165082258Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1112521556157521556Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1130419227175419227Rat
631570Bp94Blood pressure QTL 940.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132889797152403053Rat
152025235Bw194Body weight QTL 1944.86body mass (VT:0001259)1132966869252856240Rat
152025232Bw192Body weight QTL 1923.93body mass (VT:0001259)1127329268206393015Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132760602142582180Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)199645382182701046Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1109493780193400781Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1110389869155389869Rat
1300153Bp171Blood pressure QTL 1713.37arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1124975316152612788Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1110389869155389869Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)197582336142582336Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1116099376191260518Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1101594089146594089Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1131243790176243790Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)196717367160111531Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1111404407142582336Rat
737974Bp161Blood pressure QTL 1610.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1129182274174182274Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1132760429191848948Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1115183611176289080Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1102780511182384005Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1111949780210707719Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1128019551173019551Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
61399Tcat1Tongue tumor resistance QTL 13.3tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)1108680016153680016Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1102359314153680016Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1111949780210707719Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1135021436178317588Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1112521556157521556Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1111949780160574007Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1135021436180021436Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132760429191190115Rat
152025212Bw190Body weight QTL 1905.7body mass (VT:0001259)1132966869206393015Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132760429152404087Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1100345976145345976Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1132760429191848948Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1111949780228180370Rat

Markers in Region
D1Rat183  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81138,793,931 - 138,794,173 (+)Marker Load Pipeline
mRatBN7.21129,384,185 - 129,384,427 (+)MAPPERmRatBN7.2
Rnor_6.01137,083,889 - 137,084,126NCBIRnor6.0
Rnor_5.01138,077,032 - 138,077,269UniSTSRnor5.0
RGSC_v3.41131,123,181 - 131,123,541RGDRGSC3.4
RGSC_v3.41131,123,213 - 131,123,450UniSTSRGSC3.4
Celera1121,492,017 - 121,492,254UniSTS
RGSC_v3.11131,201,556 - 131,201,793RGD
RH 3.4 Map11020.0UniSTS
RH 3.4 Map11020.0RGD
RH 2.0 Map1667.4RGD
SHRSP x BN Map165.46RGD
Cytogenetic Map1q31UniSTS
BE120782  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,614,572 - 129,614,746 (+)MAPPERmRatBN7.2
Rnor_6.01137,310,199 - 137,310,372NCBIRnor6.0
Rnor_5.01138,307,450 - 138,307,623UniSTSRnor5.0
RGSC_v3.41131,355,439 - 131,355,612UniSTSRGSC3.4
Celera1121,722,390 - 121,722,563UniSTS
RH 3.4 Map11012.3UniSTS
Cytogenetic Map1q31UniSTS
BE118168  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,596,771 - 129,596,951 (+)MAPPERmRatBN7.2
Rnor_6.01137,292,400 - 137,292,579NCBIRnor6.0
Rnor_5.01138,289,651 - 138,289,830UniSTSRnor5.0
RGSC_v3.41131,337,640 - 131,337,819UniSTSRGSC3.4
Celera1121,704,595 - 121,704,774UniSTS
RH 3.4 Map11011.4UniSTS
Cytogenetic Map1q31UniSTS
AI406405  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,477,465 - 129,477,615 (+)MAPPERmRatBN7.2
Rnor_6.01137,173,207 - 137,173,356NCBIRnor6.0
Rnor_5.01138,170,458 - 138,170,607UniSTSRnor5.0
RGSC_v3.41131,218,653 - 131,218,802UniSTSRGSC3.4
Celera1121,585,318 - 121,585,467UniSTS
RH 3.4 Map11021.5UniSTS
Cytogenetic Map1q31UniSTS
AU048734  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,467,575 - 129,467,836 (+)MAPPERmRatBN7.2
Rnor_6.01137,163,313 - 137,163,573NCBIRnor6.0
Rnor_5.01138,160,564 - 138,160,824UniSTSRnor5.0
Cytogenetic Map1q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF387102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000014802   ⟹   ENSRNOP00000014802
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)Ensembl
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
Rnor_6.0 Ensembl1137,014,272 - 137,315,272 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095963   ⟹   ENSRNOP00000078206
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)Ensembl
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099409   ⟹   ENSRNOP00000077560
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,566,293 - 129,569,134 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101691   ⟹   ENSRNOP00000088819
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)Ensembl
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103755   ⟹   ENSRNOP00000086170
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,827,498 - 139,029,401 (+)Ensembl
mRatBN7.2 Ensembl1129,417,750 - 129,619,646 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108771   ⟹   ENSRNOP00000076907
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)Ensembl
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000132269   ⟹   ENSRNOP00000105310
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,827,197 - 139,029,401 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000159823   ⟹   ENSRNOP00000103715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1138,724,150 - 139,029,401 (+)Ensembl
RefSeq Acc Id: NM_001106271   ⟹   NP_001099741
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,724,150 - 139,029,401 (+)NCBI
mRatBN7.21129,314,402 - 129,619,647 (+)NCBI
Rnor_6.01137,089,558 - 137,315,272 (+)NCBI
Rnor_5.01138,007,112 - 138,312,524 (+)NCBI
RGSC_v3.41131,052,674 - 131,360,512 (+)RGD
Celera1121,422,303 - 121,727,463 (+)RGD
Sequence:
RefSeq Acc Id: XM_039105531   ⟹   XP_038961459
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105541   ⟹   XP_038961469
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105543   ⟹   XP_038961471
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105547   ⟹   XP_038961475
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105548   ⟹   XP_038961476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105549   ⟹   XP_038961477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105554   ⟹   XP_038961482
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,184 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105560   ⟹   XP_038961488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,184 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105567   ⟹   XP_038961495
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105573   ⟹   XP_038961501
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,724,318 - 139,029,401 (+)NCBI
mRatBN7.21129,314,559 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105578   ⟹   XP_038961506
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,870,661 - 139,029,401 (+)NCBI
mRatBN7.21129,464,038 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105585   ⟹   XP_038961513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,862,810 - 139,029,401 (+)NCBI
mRatBN7.21129,453,064 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105587   ⟹   XP_038961515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,890,485 - 139,029,401 (+)NCBI
mRatBN7.21129,480,729 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105588   ⟹   XP_038961516
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,555 - 139,029,401 (+)NCBI
mRatBN7.21129,511,777 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105591   ⟹   XP_038961519
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,555 - 139,029,401 (+)NCBI
mRatBN7.21129,511,776 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_063284528   ⟹   XP_063140598
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284529   ⟹   XP_063140599
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284552   ⟹   XP_063140622
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,489 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284555   ⟹   XP_063140625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,447 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284557   ⟹   XP_063140627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,556 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284561   ⟹   XP_063140631
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,554 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284569   ⟹   XP_063140639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,973,431 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284572   ⟹   XP_063140642
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,973,431 - 139,029,401 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001099741 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961459 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961475 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961476 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961477 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961482 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961488 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961495 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961506 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961513 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961515 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961516 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961519 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140598 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140599 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140622 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140625 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140627 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140631 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140639 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140642 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAL40924 (Get FASTA)   NCBI Sequence Viewer  
  EDM08536 (Get FASTA)   NCBI Sequence Viewer  
  EDM08537 (Get FASTA)   NCBI Sequence Viewer  
  EDM08538 (Get FASTA)   NCBI Sequence Viewer  
  EDM08539 (Get FASTA)   NCBI Sequence Viewer  
  EDM08540 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000014802
  ENSRNOP00000076907
  ENSRNOP00000078206
  ENSRNOP00000086170
  ENSRNOP00000088819
  ENSRNOP00000105310
GenBank Protein F1M3G7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001099741   ⟸   NM_001106271
- UniProtKB: Q8VHU6 (UniProtKB/Swiss-Prot),   F1M3G7 (UniProtKB/TrEMBL),   A0A8I6GDR4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000014802   ⟸   ENSRNOT00000014802
RefSeq Acc Id: XP_038961459   ⟸   XM_039105531
- Peptide Label: isoform X1
- UniProtKB: A0A8L2Q7A1 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961471   ⟸   XM_039105543
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961469   ⟸   XM_039105541
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961476   ⟸   XM_039105548
- Peptide Label: isoform X5
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961475   ⟸   XM_039105547
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961477   ⟸   XM_039105549
- Peptide Label: isoform X8
- UniProtKB: A0A8I6AJL6 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961495   ⟸   XM_039105567
- Peptide Label: isoform X11
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961482   ⟸   XM_039105554
- Peptide Label: isoform X9
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961488   ⟸   XM_039105560
- Peptide Label: isoform X10
- UniProtKB: A0A8I5XVJ8 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961501   ⟸   XM_039105573
- Peptide Label: isoform X1
- UniProtKB: A0A8L2Q7A1 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961513   ⟸   XM_039105585
- Peptide Label: isoform X13
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961506   ⟸   XM_039105578
- Peptide Label: isoform X12
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961515   ⟸   XM_039105587
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038961519   ⟸   XM_039105591
- Peptide Label: isoform X19
RefSeq Acc Id: XP_038961516   ⟸   XM_039105588
- Peptide Label: isoform X15
Ensembl Acc Id: ENSRNOP00000088819   ⟸   ENSRNOT00000101691
Ensembl Acc Id: ENSRNOP00000086170   ⟸   ENSRNOT00000103755
Ensembl Acc Id: ENSRNOP00000076907   ⟸   ENSRNOT00000108771
Ensembl Acc Id: ENSRNOP00000078206   ⟸   ENSRNOT00000095963
Ensembl Acc Id: ENSRNOP00000077560   ⟸   ENSRNOT00000099409
RefSeq Acc Id: XP_063140598   ⟸   XM_063284528
- Peptide Label: isoform X6
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140599   ⟸   XM_063284529
- Peptide Label: isoform X7
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140625   ⟸   XM_063284555
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063140622   ⟸   XM_063284552
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063140631   ⟸   XM_063284561
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063140627   ⟸   XM_063284557
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063140639   ⟸   XM_063284569
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063140642   ⟸   XM_063284572
- Peptide Label: isoform X22
Ensembl Acc Id: ENSRNOP00000103715   ⟸   ENSRNOT00000159823
Ensembl Acc Id: ENSRNOP00000105310   ⟸   ENSRNOT00000132269
Protein Domains
DH   PH   Phorbol-ester/DAG-type

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:727893 AgrOrtholog
BioCyc Gene G2FUF-58864 BioCyc
Ensembl Genes ENSRNOG00000010964 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000014802 ENTREZGENE
  ENSRNOT00000095963 ENTREZGENE
  ENSRNOT00000101691 ENTREZGENE
  ENSRNOT00000103755 ENTREZGENE
  ENSRNOT00000108771 ENTREZGENE
  ENSRNOT00000132269 ENTREZGENE
Gene3D-CATH 1.20.900.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
  3.30.60.20 UniProtKB/Swiss-Prot
InterPro C1-like_sf UniProtKB/Swiss-Prot
  DBL_dom_sf UniProtKB/Swiss-Prot
  DH-domain UniProtKB/Swiss-Prot
  PE/DAG-bd UniProtKB/Swiss-Prot
  PH_16 UniProtKB/Swiss-Prot
  PH_dom-like UniProtKB/Swiss-Prot
  PH_domain UniProtKB/Swiss-Prot
  Rho_GEF UniProtKB/Swiss-Prot
KEGG Report rno:293024 UniProtKB/Swiss-Prot
NCBI Gene 293024 ENTREZGENE
PANTHER AGAP007712-PA UniProtKB/Swiss-Prot
  PTHR13944:SF18 UniProtKB/Swiss-Prot
Pfam PH_16 UniProtKB/Swiss-Prot
  RhoGEF UniProtKB/Swiss-Prot
PhenoGen Akap13 PhenoGen
PROSITE DH_2 UniProtKB/Swiss-Prot
  PH_DOMAIN UniProtKB/Swiss-Prot
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000010964 RatGTEx
SMART RhoGEF UniProtKB/Swiss-Prot
  SM00109 UniProtKB/Swiss-Prot
  SM00233 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF48065 UniProtKB/Swiss-Prot
  SSF57889 UniProtKB/Swiss-Prot
UniProt A0A8I5XVJ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y2J4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AJL6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GDR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2Q7A1 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LE81_RAT UniProtKB/TrEMBL
  A0ABK0LI26_RAT UniProtKB/TrEMBL
  A6JC11_RAT UniProtKB/TrEMBL
  A6JC12_RAT UniProtKB/TrEMBL
  A6JC13_RAT UniProtKB/TrEMBL
  AKP13_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q8VHU6 ENTREZGENE
UniProt Secondary Q8VHU6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-25 Akap13  A-kinase anchoring protein 13  Akap13  A kinase (PRKA) anchor protein 13  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-11 Akap13  A kinase (PRKA) anchor protein 13  LOC293024  protein kinase A anchoring protein Rt31  Symbol and Name updated to reflect Human and Mouse nomenclature 625702 APPROVED