Rpl29 (ribosomal protein L29) - Rat Genome Database

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Gene: Rpl29 (ribosomal protein L29) Mus musculus
Analyze
Symbol: Rpl29
Name: ribosomal protein L29
RGD ID: 62361
MGI Page MGI
Description: Enables heparin binding activity. A structural constituent of ribosome. Acts upstream of or within cell-substrate adhesion; fibroblast proliferation; and translation. Located in cytosolic ribosome and membrane. Part of cytosolic large ribosomal subunit. Is active in synapse. Is expressed in several structures, including gonad; heart; liver; lung; and metanephros. Orthologous to human RPL29 (ribosomal protein L29).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 60S ribosomal protein L29; large ribosomal subunit protein eL29; MGC107574; MGC107575; MGC107576; Rp; Rpl43
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm10548   Gm10709   Gm11270   Gm13841   Gm14036   Gm15454   Gm4889   Gm4945   Gm5561   Gm6344   Gm8210   Gm8580   Rpl27rt   Rpl29-ps1   Rpl29-ps2   Rpl29-ps4   Rpl29-ps5   Rpl29-ps6  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,306,631 - 106,308,768 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,306,653 - 106,308,767 (+)EnsemblGRCm39 Ensembl
GRCm389106,428,889 - 106,431,568 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,429,454 - 106,431,568 (+)EnsemblGRCm38mm10GRCm38
MGSCv379106,331,870 - 106,333,898 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369106,287,640 - 106,289,668 (+)NCBIMGSCv36mm8
Celera9106,056,937 - 106,058,955 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structures of the human and Drosophila 80S ribosome. Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Identification of candidate lung cancer susceptibility genes in mouse using oligonucleotide arrays. Lemon WJ, etal., J Med Genet 2002 Sep;39(9):644-55.
4. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8224911   PMID:9737974   PMID:10349636   PMID:10922068   PMID:10964519   PMID:11042159   PMID:11076861   PMID:11259264   PMID:11803571   PMID:12477932   PMID:12919102   PMID:14610273  
PMID:15489334   PMID:16141072   PMID:16141073   PMID:16452087   PMID:17195189   PMID:18661500   PMID:18799693   PMID:20362701   PMID:21267068   PMID:21529712   PMID:21873635   PMID:22001906  
PMID:22198155   PMID:23118343   PMID:23665500   PMID:25901680   PMID:26336360   PMID:28378742   PMID:30196744   PMID:30457570   PMID:30562941   PMID:32098917   PMID:32325033   PMID:32554809  
PMID:33004906   PMID:33554859   PMID:35099001   PMID:36417873   PMID:36517592  


Genomics

Comparative Map Data
Rpl29
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,306,631 - 106,308,768 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,306,653 - 106,308,767 (+)EnsemblGRCm39 Ensembl
GRCm389106,428,889 - 106,431,568 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,429,454 - 106,431,568 (+)EnsemblGRCm38mm10GRCm38
MGSCv379106,331,870 - 106,333,898 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369106,287,640 - 106,289,668 (+)NCBIMGSCv36mm8
Celera9106,056,937 - 106,058,955 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.49NCBI
RPL29
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,993,522 - 51,995,895 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,993,522 - 51,995,895 (-)EnsemblGRCh38hg38GRCh38
GRCh37352,027,538 - 52,029,911 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36352,002,684 - 52,004,998 (-)NCBINCBI36Build 36hg18NCBI36
Build 34352,002,684 - 52,004,998NCBI
Celera352,006,920 - 52,009,228 (-)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef352,090,984 - 52,093,304 (-)NCBIHuRef
CHM1_1351,980,247 - 51,982,561 (-)NCBICHM1_1
T2T-CHM13v2.0352,026,442 - 52,028,821 (-)NCBIT2T-CHM13v2.0
Rpl29
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88115,056,443 - 115,949,677 (+)NCBIGRCr8
mRatBN7.28107,068,929 - 107,070,963 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,068,480 - 107,070,914 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,691,899 - 112,693,933 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08110,891,075 - 110,893,109 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,733,855 - 108,735,889 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,131,228 - 115,133,401 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,131,367 - 115,133,401 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,495,464 - 114,497,498 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,573,459 - 111,575,493 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18111,592,913 - 111,594,948 (+)NCBI
Celera8106,380,871 - 106,382,905 (+)NCBICelera
Cytogenetic Map8q32NCBI
Rpl29
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,633,377 - 3,635,590 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555323,633,260 - 3,636,068 (-)NCBIChiLan1.0ChiLan1.0
RPL29
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2251,988,050 - 51,990,436 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1351,992,820 - 51,995,116 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0351,935,053 - 51,937,412 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
RPL29
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,727,161 - 37,729,738 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,708,857 - 37,711,231 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02038,077,938 - 38,080,329 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2038,077,749 - 38,080,328 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,441,554 - 37,447,226 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,850,328 - 37,852,707 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,135,177 - 38,137,563 (+)NCBIUU_Cfam_GSD_1.0
Rpl29
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,576,559 - 66,587,413 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365293,337,056 - 3,339,683 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPL29
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,119,539 - 34,121,859 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,119,541 - 34,121,842 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,316,234 - 37,318,518 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap13q21-q22NCBI
RPL29
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,362,348 - 13,365,013 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041153,541,343 - 153,544,070 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl29
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247305,807,029 - 5,810,138 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rpl29
45 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:283
Count of miRNA genes:129
Interacting mature miRNAs:139
Transcripts:ENSMUST00000059802, ENSMUST00000150576
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972859058106859205Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972859058106859205Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974250230108250378Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976417989110418183Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985779563108518385Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994863354112701997Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103118511124359700Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103118511124359700Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103118511124359700Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001324533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001324534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC151729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF236069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC081467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC087950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC096575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY002054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L08651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000059802   ⟹   ENSMUSP00000080203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9106,306,738 - 106,308,766 (+)Ensembl
GRCm38.p6 Ensembl9106,429,539 - 106,431,567 (+)Ensembl
RefSeq Acc Id: ENSMUST00000098994   ⟹   ENSMUSP00000096592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9106,306,737 - 106,308,707 (+)Ensembl
GRCm38.p6 Ensembl9106,429,538 - 106,431,508 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150576   ⟹   ENSMUSP00000117834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9106,306,653 - 106,308,767 (+)Ensembl
GRCm38.p6 Ensembl9106,429,454 - 106,431,568 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213448   ⟹   ENSMUSP00000149722
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9106,306,754 - 106,308,587 (+)Ensembl
GRCm38.p6 Ensembl9106,429,555 - 106,431,388 (+)Ensembl
RefSeq Acc Id: ENSMUST00000214067   ⟹   ENSMUSP00000150846
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9106,308,268 - 106,308,766 (+)Ensembl
GRCm38.p6 Ensembl9106,431,069 - 106,431,567 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217081   ⟹   ENSMUSP00000150339
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9106,306,761 - 106,308,371 (+)Ensembl
GRCm38.p6 Ensembl9106,429,562 - 106,431,172 (+)Ensembl
RefSeq Acc Id: NM_001324533   ⟹   NP_001311462
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,306,762 - 106,308,768 (+)NCBI
GRCm389106,429,411 - 106,431,568 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001324534   ⟹   NP_001311463
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,306,762 - 106,308,768 (+)NCBI
GRCm389106,429,411 - 106,431,568 (+)NCBI
Sequence:
RefSeq Acc Id: NM_009082   ⟹   NP_033108
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,306,762 - 106,308,768 (+)NCBI
GRCm389106,429,411 - 106,431,568 (+)NCBI
MGSCv379106,331,870 - 106,333,898 (+)RGD
Celera9106,056,937 - 106,058,955 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006511660   ⟹   XP_006511723
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,306,631 - 106,308,767 (+)NCBI
GRCm389106,428,889 - 106,431,568 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_033108   ⟸   NM_009082
- UniProtKB: P47915 (UniProtKB/Swiss-Prot),   Q5M8M8 (UniProtKB/TrEMBL),   D3Z1N9 (UniProtKB/TrEMBL),   A0A1L1SS27 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006511723   ⟸   XM_006511660
- Peptide Label: isoform X1
- UniProtKB: P47915 (UniProtKB/Swiss-Prot),   Q5M8M8 (UniProtKB/TrEMBL),   D3Z1N9 (UniProtKB/TrEMBL),   A0A1L1SS27 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001311463   ⟸   NM_001324534
- UniProtKB: P47915 (UniProtKB/Swiss-Prot),   Q5M8M8 (UniProtKB/TrEMBL),   D3Z1N9 (UniProtKB/TrEMBL),   A0A1L1SS27 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001311462   ⟸   NM_001324533
- UniProtKB: P47915 (UniProtKB/Swiss-Prot),   Q5M8M8 (UniProtKB/TrEMBL),   D3Z1N9 (UniProtKB/TrEMBL),   A0A1L1SS27 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000117834   ⟸   ENSMUST00000150576
RefSeq Acc Id: ENSMUSP00000150339   ⟸   ENSMUST00000217081
RefSeq Acc Id: ENSMUSP00000080203   ⟸   ENSMUST00000059802
RefSeq Acc Id: ENSMUSP00000096592   ⟸   ENSMUST00000098994
RefSeq Acc Id: ENSMUSP00000149722   ⟸   ENSMUST00000213448
RefSeq Acc Id: ENSMUSP00000150846   ⟸   ENSMUST00000214067

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P47915-F1-model_v2 AlphaFold P47915 1-160 view protein structure

Promoters
RGD ID:6845128
Promoter ID:MM_KWN:58664
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_009082,   OTTMUST00000085045
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369106,331,519 - 106,332,019 (+)MPROMDB
RGD ID:8670722
Promoter ID:EPDNEW_M13392
Type:initiation region
Name:Rpl29-2_1
Description:Mus musculus ribosomal protein L29 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389106,429,532 - 106,429,592EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:99687 AgrOrtholog
Ensembl Genes ENSMUSG00000048758 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000059802 ENTREZGENE
  ENSMUST00000059802.7 UniProtKB/Swiss-Prot
  ENSMUST00000098994.7 UniProtKB/Swiss-Prot
  ENSMUST00000150576 ENTREZGENE
  ENSMUST00000150576.8 UniProtKB/Swiss-Prot
  ENSMUST00000213448 ENTREZGENE
  ENSMUST00000213448.2 UniProtKB/TrEMBL
  ENSMUST00000214067.2 UniProtKB/TrEMBL
  ENSMUST00000217081.2 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.1730 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ribosomal_L29e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19944 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:99687 ENTREZGENE
NCBI Gene 19944 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L29 UniProtKB/Swiss-Prot
  60S RIBOSOMAL PROTEIN L29 UniProtKB/TrEMBL
  60S RIBOSOMAL PROTEIN L29 UniProtKB/TrEMBL
  PTHR12884 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ribosomal_L29e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rpl29 PhenoGen
UniProt A0A1L1SS27 ENTREZGENE, UniProtKB/TrEMBL
  A0A1L1STJ3_MOUSE UniProtKB/TrEMBL
  A0A1L1SUN1_MOUSE UniProtKB/TrEMBL
  D3Z1N9 ENTREZGENE
  P47915 ENTREZGENE
  Q5M8M8 ENTREZGENE, UniProtKB/TrEMBL
  RL29_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary D3Z1N9 UniProtKB/TrEMBL