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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal dental pulp morphology
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Accession:MP:0013250 term browser browse the term
Definition:any structural anomaly of the soft tissue within the pulp cavity located in the center of a tooth, comprised of living connective tissue containing blood vessels, nerves and lymphatics, and a layer of odontoblasts at the periphery, which participate in dentin repair
Synonyms:exact_synonym: abnormal dentinal pulp morphology;   abnormal tooth pulp morphology


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abnormal dental pulp morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssu2 ssu-2 homolog IAGP MGI PMID:27680507 NCBI chr 6:112,336,283...112,365,160
Ensembl chr 6:112,336,285...112,364,984 		JBrowse link
G Tnn tenascin N IAGP MGI PMID:33552067 NCBI chr 1:159,912,599...159,981,242
Ensembl chr 1:159,912,599...159,981,150 		JBrowse link
abnormal odontoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrx1 paired related homeobox 1 IAGP MGI PMID:9876178 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 IAGP MGI PMID:9876178 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Tnn tenascin N IAGP MGI PMID:33552067 NCBI chr 1:159,912,599...159,981,242
Ensembl chr 1:159,912,599...159,981,150 		JBrowse link
abnormal odontoblast morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, liver/bone/kidney IAGP MGI PMID:22991301 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695 		JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B IAGP MGI PMID:19251658 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Irx1 Iroquois homeobox 1 IAGP MGI PMID:28746823 NCBI chr13:72,106,351...72,111,842
Ensembl chr13:72,106,040...72,111,842 		JBrowse link
G Notum notum palmitoleoyl-protein carboxylesterase IAGP MGI PMID:26926082 NCBI chr11:120,544,614...120,552,019
Ensembl chr11:120,544,614...120,552,001 		JBrowse link
G Pthlh parathyroid hormone-like peptide IAGP MGI PMID:9391087 NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681 		JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:11044393 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
dental pulp necrosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L IAGP MGI PMID:12163394 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704 		JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase IAGP MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832 		JBrowse link
G Il1r1 interleukin 1 receptor, type I IAGP MGI PMID:10595943 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417 		JBrowse link
G Notum notum palmitoleoyl-protein carboxylesterase IAGP MGI PMID:26926082 NCBI chr11:120,544,614...120,552,019
Ensembl chr11:120,544,614...120,552,001 		JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a IAGP MGI PMID:10595943 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447 		JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b IAGP MGI PMID:10595943 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440 		JBrowse link
dental pulp stones term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt10a wingless-type MMTV integration site family, member 10A IAGP MGI PMID:25629078 NCBI chr 1:74,831,178...74,843,335
Ensembl chr 1:74,830,675...74,843,338 		JBrowse link
enlarged dental pulp chamber term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, liver/bone/kidney IAGP MGI PMID:22991301 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695 		JBrowse link
increased odontoblast number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssu2 ssu-2 homolog IAGP MGI PMID:27680507 NCBI chr 6:112,336,283...112,365,160
Ensembl chr 6:112,336,285...112,364,984 		JBrowse link
taurodontia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf6 interferon regulatory factor 6 IAGP MGI PMID:27369589 NCBI chr 1:192,835,420...192,854,344
Ensembl chr 1:192,835,419...192,854,331 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 IAGP MGI PMID:27369589 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Wnt10a wingless-type MMTV integration site family, member 10A IAGP MGI PMID:25629078 NCBI chr 1:74,831,178...74,843,335
Ensembl chr 1:74,830,675...74,843,338 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16762
    craniofacial phenotype 1621
      abnormal craniofacial morphology 1621
        abnormal facial morphology 1086
          abnormal mouth morphology 802
            abnormal tooth morphology 355
              abnormal dental pulp cavity morphology 21
                abnormal dental pulp morphology 18
                  abnormal dental pulp canal morphology + 0
                  abnormal dental pulp chamber morphology + 1
                  abnormal odontoblast morphology + 10
                  dental pulp necrosis 6
                  dental pulp stones 1
                  taurodontia 3
Path 2
Term Annotations click to browse term
  mammalian phenotype 16762
    skeleton phenotype 3344
      abnormal skeleton morphology 3156
        abnormal axial skeleton morphology 1770
          abnormal craniofacial bone morphology 1028
            abnormal cranium morphology 1012
              abnormal viscerocranium morphology 748
                abnormal jaw morphology 677
                  abnormal dental arch morphology 356
                    abnormal tooth morphology 355
                      abnormal dental pulp cavity morphology 21
                        abnormal dental pulp morphology 18
                          abnormal dental pulp canal morphology + 0
                          abnormal dental pulp chamber morphology + 1
                          abnormal odontoblast morphology + 10
                          dental pulp necrosis 6
                          dental pulp stones 1
                          taurodontia 3
paths to the root