ONTOLOGY REPORT - ANNOTATIONS
Term: DNA repair complex
Accession: GO:1990391
browse the term
Definition: A protein complex involved in DNA repair processes including direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Synonyms: exact_synonym: DNA damage repair complex
narrow_synonym: WHY1 complex
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Ascc1
activating signal cointegrator 1 complex subunit 1
located_in
ISO
(PMID:29997253)
RGD
PMID:29997253
NCBI chr20:27,941,053...28,031,272
Ensembl chr20:27,941,283...28,031,272
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Ascc2
activating signal cointegrator 1 complex subunit 2
located_in
ISO
(PMID:29997253)
RGD
PMID:29997253
NCBI chr14:79,503,449...79,547,801
Ensembl chr14:79,503,517...79,545,494
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Ascc3
activating signal cointegrator 1 complex subunit 3
located_in
ISO
(PMID:29997253)
RGD
PMID:29997253
NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165
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Atm
ATM serine/threonine kinase
part_of
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Brca1
BRCA1, DNA repair associated
located_in part_of
ISO IEA
(PMID:19369211) GO_REF:0000107
RGD Ensembl
PMID:19369211
GO_REF:0000107
NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
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Brca2
BRCA2, DNA repair associated
located_in part_of
ISO IEA
(PMID:19369211) GO_REF:0000107
RGD Ensembl
PMID:19369211
GO_REF:0000107
NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
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Fancd2
FA complementation group D2
located_in part_of
ISO IEA
(PMID:32269332) GO_REF:0000107
RGD Ensembl
PMID:32269332
GO_REF:0000107
NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
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Fanci
FA complementation group I
located_in
ISO
(PMID:32269332)
RGD
PMID:32269332
NCBI chr 1:133,327,264...133,383,661
Ensembl chr 1:133,327,297...133,383,640
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Kdm1a
lysine demethylase 1A
part_of
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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Palb2
partner and localizer of BRCA2
located_in
ISO
(PMID:19369211)
RGD
PMID:19369211
NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990
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Phf21a
PHD finger protein 21A
part_of
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr 3:78,158,760...78,331,903
Ensembl chr 3:78,194,549...78,331,865
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Rcor1
REST corepressor 1
part_of
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr 6:130,069,606...130,146,164
Ensembl chr 6:130,069,392...130,146,153
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Rnf168
ring finger protein 168
part_of
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
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Tp53bp1
tumor protein p53 binding protein 1
part_of
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
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Lig4
DNA ligase 4
part_of
ISO IBA
(PMID:9809069) GO_REF:0000033
RGD GO_Central
PMID:9809069
GO_REF:0000033
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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Nhej1
nonhomologous end-joining factor 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444
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Xrcc4
X-ray repair cross complementing 4
part_of
ISO IBA
(PMID:9242410) GO_REF:0000033
RGD GO_Central
PMID:9242410
GO_REF:0000033
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
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Lig4
DNA ligase 4
part_of
ISO IBA
(PMID:15194694), (PMID:34352203) GO_REF:0000033
RGD GO_Central
PMID:15194694 PMID:34352203
GO_REF:0000033
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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Nhej1
nonhomologous end-joining factor 1
part_of
IEA ISO ISS
GO_REF:0000107 (PMID:34352203) GO_REF:0000024
Ensembl RGD UniProt
PMID:34352203
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444
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Prkdc
protein kinase, DNA-activated, catalytic subunit
part_of
ISO
(PMID:15194694), (PMID:34352203)
RGD
PMID:15194694 PMID:34352203
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
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Xrcc4
X-ray repair cross complementing 4
part_of
ISO IBA
(PMID:15194694), (PMID:34352203) GO_REF:0000033
RGD GO_Central
PMID:15194694 PMID:34352203
GO_REF:0000033
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
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Xrcc5
X-ray repair cross complementing 5
part_of
TAS ISO
(PMID:34352203)
RGD
PMID:34352203 PMID:11966321
RGD:727219
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
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Xrcc6
X-ray repair cross complementing 6
part_of
ISO
(PMID:34352203)
RGD
PMID:34352203
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
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Dclre1c
DNA cross-link repair 1C
part_of
ISO IEA ISS
(PMID:25941166) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25941166
GO_REF:0000024 GO_REF:0000107
NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186
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Lig4
DNA ligase 4
part_of
ISO
(PMID:20383123), (PMID:25941166)
RGD
PMID:20383123 PMID:25941166
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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Nhej1
nonhomologous end-joining factor 1
part_of
ISO ISS
(PMID:20383123), (PMID:25941166) GO_REF:0000024
RGD UniProt
PMID:20383123 PMID:25941166
GO_REF:0000024
NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444
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Paxx
PAXX, non-homologous end joining factor
part_of
ISO IBA
(PMID:25670504), (PMID:25941166) GO_REF:0000033
RGD GO_Central
PMID:25670504 PMID:25941166
GO_REF:0000033
NCBI chr 3:8,274,762...8,276,322
Ensembl chr 3:8,274,762...8,276,521
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Prkdc
protein kinase, DNA-activated, catalytic subunit
part_of
ISO
(PMID:20383123), (PMID:25941166)
RGD
PMID:20383123 PMID:25941166
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
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Xrcc4
X-ray repair cross complementing 4
part_of
ISO
(PMID:20383123), (PMID:25941166)
RGD
PMID:20383123 PMID:25941166
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
G
Xrcc5
X-ray repair cross complementing 5
part_of
ISO
(PMID:20383123), (PMID:25941166)
RGD
PMID:20383123 PMID:25941166
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
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Xrcc6
X-ray repair cross complementing 6
part_of
ISO
(PMID:20383123), (PMID:25941166)
RGD
PMID:20383123 PMID:25941166
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
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