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ONTOLOGY REPORT - ANNOTATIONS

Term:atrial septum development
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Accession:GO:0003283 term browser browse the term
Definition:The progression of the atrial septum over time, from its initial formation to the mature structure.


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atrial septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:126,715,256...127,293,996
Ensembl chr 3:126,715,261...127,292,999 		JBrowse link
G Dand5 DAN domain family member 5, BMP antagonist involved_in IMP (MGI:3055649|PMID:15466485) BHF-UCL PMID:15466485 MGI:3055649 NCBI chr 8:85,542,034...85,558,894
Ensembl chr 8:85,542,033...85,559,038 		JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 acts_upstream_of_or_within IGI (PMID:22821713) MGI PMID:22821713 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Mdm4 transformed mouse 3T3 cell double minute 4 acts_upstream_of_or_within IGI (PMID:22821713) MGI PMID:22821713 NCBI chr 1:132,913,843...132,958,325
Ensembl chr 1:132,887,222...132,958,299 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within IMP (PMID:19084512) MGI PMID:19084512 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
atrial septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IMP (MGI:3851675|PMID:19409885) BHF-UCL PMID:19409885 MGI:3851675 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IMP (PMID:17023674) MGI PMID:17023674 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:10969038) MGI PMID:10969038 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Notch2 notch 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IGI (PMID:22898775) MGI PMID:22898775 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Tbx20 T-box 20 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within IGI (PMID:22898775) MGI PMID:22898775 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in IMP (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
atrial septum primum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in IMP
ISO		 (MGI:3610266|PMID:16140292) BHF-UCL
MGI		 PMID:16140292 GO_REF:0000119 MGI:3610266 MGI:4834177 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (MGI:3769320|PMID:17643447) BHF-UCL PMID:17643447 MGI:3769320 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:19483677) MGI PMID:19483677 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:3603061|PMID:16109771) BHF-UCL PMID:16109771 MGI:3603061 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347) BHF-UCL PMID:11390347 MGI:3609313 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
atrial septum secundum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:19483677) MGI PMID:19483677 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
septum primum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:10969038) MGI PMID:10969038 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
septum secundum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28576
    developmental process 7377
      anatomical structure development 6849
        cardiac septum development 130
          atrial septum development 24
            atrial septum intermedium development + 0
            atrial septum morphogenesis + 17
            septum primum development + 6
            septum secundum development + 3
Path 2
Term Annotations click to browse term
  biological_process 28576
    developmental process 7377
      anatomical structure development 6849
        multicellular organism development 5442
          system development 4671
            circulatory system development 1425
              heart development 756
                cardiac chamber development 208
                  cardiac atrium development 42
                    atrial septum development 24
                      atrial septum intermedium development + 0
                      atrial septum morphogenesis + 17
                      septum primum development + 6
                      septum secundum development + 3
paths to the root