Dnttip2 (deoxynucleotidyltransferase, terminal, interacting protein 2) - Rat Genome Database

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Gene: Dnttip2 (deoxynucleotidyltransferase, terminal, interacting protein 2) Rattus norvegicus
Analyze
Symbol: Dnttip2
Name: deoxynucleotidyltransferase, terminal, interacting protein 2
RGD ID: 6497192
Description: Predicted to be involved in RNA processing and ribosomal small subunit biogenesis. Predicted to be located in chromosome and nucleoplasm. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Orthologous to human DNTTIP2 (deoxynucleotidyltransferase terminal interacting protein 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: deoxynucleotidyltransferase terminal-interacting protein 2; deoxynucleotidyltransferase terminal-interacting protein 2-like; LOC100910753; RGD1309084
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82213,058,975 - 213,071,020 (+)NCBIGRCr8
mRatBN7.22210,374,321 - 210,386,366 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2210,374,289 - 210,385,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2218,047,634 - 218,059,654 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02215,955,400 - 215,967,419 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02210,797,358 - 210,809,377 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02225,854,618 - 225,867,103 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2225,854,629 - 225,866,357 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02243,890,016 - 243,901,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2202,803,891 - 202,814,911 (+)NCBICelera
Cytogenetic Map2q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IEA,ISO)
nucleolus  (IBA,ISO)
nucleoplasm  (IEA,ISO)
small-subunit processome  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:22658674   PMID:22681889  


Genomics

Comparative Map Data
Dnttip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82213,058,975 - 213,071,020 (+)NCBIGRCr8
mRatBN7.22210,374,321 - 210,386,366 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2210,374,289 - 210,385,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2218,047,634 - 218,059,654 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02215,955,400 - 215,967,419 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02210,797,358 - 210,809,377 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02225,854,618 - 225,867,103 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2225,854,629 - 225,866,357 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02243,890,016 - 243,901,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2202,803,891 - 202,814,911 (+)NCBICelera
Cytogenetic Map2q42NCBI
DNTTIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38193,866,284 - 93,879,206 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl193,866,284 - 93,879,918 (-)EnsemblGRCh38hg38GRCh38
GRCh37194,331,840 - 94,344,762 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36194,107,924 - 94,117,330 (-)NCBINCBI36Build 36hg18NCBI36
Celera192,586,515 - 92,598,428 (-)NCBICelera
Cytogenetic Map1p22.1NCBI
HuRef192,453,561 - 92,465,814 (-)NCBIHuRef
CHM1_1194,449,991 - 94,459,730 (-)NCBICHM1_1
T2T-CHM13v2.0193,712,032 - 93,727,460 (-)NCBIT2T-CHM13v2.0
Dnttip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393122,068,045 - 122,078,920 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3122,068,037 - 122,078,920 (+)EnsemblGRCm39 Ensembl
GRCm383122,274,414 - 122,285,271 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3122,274,388 - 122,285,271 (+)EnsemblGRCm38mm10GRCm38
MGSCv373121,977,332 - 121,988,189 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363122,266,436 - 122,277,293 (+)NCBIMGSCv36mm8
Celera3128,671,337 - 128,682,192 (+)NCBICelera
Cytogenetic Map3G1NCBI
cM Map352.94NCBI
Dnttip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955423817,108 - 828,618 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955423817,034 - 828,706 (+)NCBIChiLan1.0ChiLan1.0
DNTTIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21133,138,378 - 133,154,936 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11132,297,820 - 132,312,040 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0196,528,951 - 96,542,869 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1195,260,910 - 95,272,834 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl195,260,910 - 95,272,834 (-)Ensemblpanpan1.1panPan2
DNTTIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1655,248,437 - 55,264,187 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl655,235,542 - 55,263,728 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha657,956,352 - 57,973,334 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0655,624,197 - 55,640,983 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl655,624,212 - 55,671,907 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1655,303,929 - 55,320,881 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0655,289,044 - 55,305,809 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0655,741,618 - 55,758,528 (+)NCBIUU_Cfam_GSD_1.0
Dnttip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058103,556,052 - 103,566,645 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365375,380,919 - 5,394,944 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365375,381,358 - 5,391,956 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNTTIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4123,394,740 - 123,414,511 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14123,394,771 - 123,408,460 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24135,040,518 - 135,053,878 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNTTIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12039,368,484 - 39,381,022 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2039,369,348 - 39,381,537 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603378,669,649 - 78,682,103 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnttip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247423,759,621 - 3,770,475 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dnttip2
108 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:11
Count of miRNA genes:9
Interacting mature miRNAs:11
Transcripts:ENSRNOT00000036931
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
2301408Kidm36Kidney mass QTL 360.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2190613715226808892Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2168594495213594495Rat
1598813Memor9Memory QTL 92.7exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2199341726234244620Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
2298479Eau5Experimental allergic uveoretinitis QTL 50.0021uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)2202446871237938339Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
61458Bp10Blood pressure QTL 103.42arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat
70162Bp63Blood pressure QTL 635.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
738013Alc15Alcohol consumption QTL 154.10.00022consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)2184165752229165752Rat
61398Bp50Blood pressure QTL 504.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189599258234599258Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2193452645245889826Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561221167075Rat
61469Bp16Blood pressure QTL 165.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)2157142078211086598Rat
1359031Bp275Blood pressure QTL 275arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2185876309219753474Rat
1581499Esta2Estrogen-induced thymic atrophy QTL 2thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2189599258226936289Rat
9589044Scfw1Subcutaneous fat weight QTL 15.80.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)2182171407227171407Rat
8694435Bw166Body weight QTL 16614.080.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)2182171407227171407Rat
61417Cia10Collagen induced arthritis QTL 103.4joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)2179946951224946951Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
631203Gluco14Glucose level QTL 140.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)2206665645219003804Rat
8694383Bw158Body weight QTL 1587.690.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)2182171407227171407Rat
1598835Anxrr18Anxiety related response QTL 182.98body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)2200990457245990457Rat
1598838Bp290Blood pressure QTL 2901.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2166539266211539266Rat
1298083Bp158Blood pressure QTL 1582.62arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1331745Bp203Blood pressure QTL 2034.377arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2189599258218414891Rat
2306901Bp337Blood pressure QTL 3370.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2164073756227146641Rat
8694194Abfw1Abdominal fat weight QTL 111.70.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)2182171407227171407Rat
61366Iddm3Insulin dependent diabetes mellitus QTL 34.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2189599258234599258Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2136916935213594495Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
2299161Iddm33Insulin dependent diabetes mellitus QTL 332.98blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2206312063220876787Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
2293084Iddm26Insulin dependent diabetes mellitus QTL 262.9blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2174930955213594495Rat
2300189Bmd48Bone mineral density QTL 485.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)2179335906224335906Rat
8662843Vetf9Vascular elastic tissue fragility QTL 92.05thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2157142078226277316Rat

Markers in Region
RH140811  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22210,384,579 - 210,385,402 (+)MAPPERmRatBN7.2
Rnor_6.02225,865,319 - 225,866,141NCBIRnor6.0
Rnor_5.02243,900,718 - 243,901,540UniSTSRnor5.0
RGSC_v3.42218,932,533 - 218,933,355UniSTSRGSC3.4
Celera2202,813,125 - 202,813,947UniSTS
RH 3.4 Map21523.0UniSTS
AU045884  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22210,384,579 - 210,385,385 (+)MAPPERmRatBN7.2
Rnor_6.02225,865,319 - 225,866,124NCBIRnor6.0
Rnor_5.02243,900,718 - 243,901,523UniSTSRnor5.0
RGSC_v3.42218,932,533 - 218,933,338UniSTSRGSC3.4
Celera2202,813,125 - 202,813,930UniSTS
RH124727  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22210,384,579 - 210,384,665 (+)MAPPERmRatBN7.2
Rnor_6.02225,865,319 - 225,865,404NCBIRnor6.0
Rnor_5.02243,900,718 - 243,900,803UniSTSRnor5.0
RGSC_v3.42218,932,533 - 218,932,618UniSTSRGSC3.4
Celera2202,813,125 - 202,813,210UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000036931   ⟹   ENSRNOP00000037874
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2210,374,308 - 210,385,581 (+)Ensembl
Rnor_6.0 Ensembl2225,854,629 - 225,866,357 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097814   ⟹   ENSRNOP00000077110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2210,374,289 - 210,383,466 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108329   ⟹   ENSRNOP00000086946
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2210,374,289 - 210,384,923 (+)Ensembl
RefSeq Acc Id: NM_001399742   ⟹   NP_001386671
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82213,058,975 - 213,071,020 (+)NCBI
mRatBN7.22210,374,321 - 210,386,366 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001386671 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000037874.5
  ENSRNOP00000077110.1
  ENSRNOP00000086946.1
Ensembl Acc Id: ENSRNOP00000037874   ⟸   ENSRNOT00000036931
Ensembl Acc Id: ENSRNOP00000077110   ⟸   ENSRNOT00000097814
Ensembl Acc Id: ENSRNOP00000086946   ⟸   ENSRNOT00000108329
RefSeq Acc Id: NP_001386671   ⟸   NM_001399742
- UniProtKB: D3ZHM7 (UniProtKB/TrEMBL)
Protein Domains
Fcf2 pre-rRNA processing C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZHM7-F1-model_v2 AlphaFold D3ZHM7 1-761 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691726
Promoter ID:EPDNEW_R2248
Type:initiation region
Name:Dnttip2_1
Description:deoxynucleotidyltransferase, terminal, interacting protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02225,854,650 - 225,854,710EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:6497192 AgrOrtholog
BioCyc Gene G2FUF-51378 BioCyc
Ensembl Genes ENSRNOG00000025025 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000036931.7 UniProtKB/TrEMBL
  ENSRNOT00000097814.1 UniProtKB/TrEMBL
  ENSRNOT00000108329.1 UniProtKB/TrEMBL
InterPro Fcf2 UniProtKB/TrEMBL
  Fcf2/DNTTIP2 UniProtKB/TrEMBL
NCBI Gene LOC100910753 ENTREZGENE
PANTHER DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2 UniProtKB/TrEMBL
  PTHR21686 UniProtKB/TrEMBL
Pfam Fcf2 UniProtKB/TrEMBL
PhenoGen Dnttip2 PhenoGen
RatGTEx ENSRNOG00000025025 RatGTEx
UniProt A0A8I5Y170_RAT UniProtKB/TrEMBL
  A0A8I6GEL2_RAT UniProtKB/TrEMBL
  D3ZHM7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-08 Dnttip2  deoxynucleotidyltransferase, terminal, interacting protein 2  LOC100910753  deoxynucleotidyltransferase terminal-interacting protein 2-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100910753  deoxynucleotidyltransferase terminal-interacting protein 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL