Mt1f (metallothionein 1F) - Rat Genome Database

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Gene: Mt1f (metallothionein 1F) Rattus norvegicus
Analyze
Symbol: Mt1f
Name: metallothionein 1F
RGD ID: 2324089
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: hypothetical protein LOC100362769; LOC100362769; metallothionein-1-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X37,806,740 - 37,814,784 (-)NCBIGRCr8
mRatBN7.2X33,998,195 - 34,006,095 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X35,783,209 - 35,790,894 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X36,112,833 - 36,145,674 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X55,288,526 - 55,288,735 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX34,685,122 - 34,693,125 (-)NCBICelera
Cytogenetic MapXq14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Mt1f
37 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2099094741052531Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2099094741203591Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_039100507   ⟹   XP_038956435
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X37,806,740 - 37,814,784 (-)NCBI
mRatBN7.2X33,998,195 - 34,006,095 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038956435 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038956435   ⟸   XM_039100507


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2506 BioCyc
NCBI Gene 100362769 ENTREZGENE
PhenoGen Mt1f PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-07-18 Mt1f  metallothionein 1F  LOC100362769  hypothetical protein LOC100362769  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-06 LOC100362769  hypothetical protein LOC100362769      Symbol and Name status set to provisional 70820 PROVISIONAL