Pllp (plasmolipin) - Rat Genome Database

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Gene: Pllp (plasmolipin) Heterocephalus glaber
Analyze
Symbol: Pllp
Name: plasmolipin
RGD ID: 18913321
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); schizophrenia (ortholog); FOUND IN compact myelin (ortholog); membrane raft (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,779,173 - 28,797,638 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474628,779,154 - 28,797,828 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Pllp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,779,173 - 28,797,638 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474628,779,154 - 28,797,828 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
PLLP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381657,256,097 - 57,284,672 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1657,248,547 - 57,284,675 (-)Ensemblhg38GRCh38
GRCh371657,290,009 - 57,318,584 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361655,847,511 - 55,876,071 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341655,847,509 - 55,876,072NCBI
Celera1641,789,697 - 41,818,338 (-)NCBICelera
Cytogenetic Map16q13NCBI
HuRef1643,159,649 - 43,188,192 (-)NCBIHuRef
CHM1_11658,698,255 - 58,726,816 (-)NCBICHM1_1
T2T-CHM13v2.01663,052,086 - 63,080,643 (-)NCBIT2T-CHM13v2.0
Pllp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,401,523 - 95,422,870 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,401,522 - 95,422,906 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38894,674,895 - 94,696,242 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl894,674,894 - 94,696,278 (-)Ensemblmm10GRCm38
MGSCv37897,198,795 - 97,220,142 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36897,564,024 - 97,585,371 (-)NCBIMGSCv36mm8
Celera899,003,368 - 99,024,674 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map846.66NCBI
Pllp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81910,321,080 - 10,341,869 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1910,321,080 - 10,342,226 (+)EnsemblGRCr8
mRatBN7.21910,315,104 - 10,335,892 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1910,315,104 - 10,335,892 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1910,278,287 - 10,299,166 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01911,045,134 - 11,066,015 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01910,332,082 - 10,352,963 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1910,310,230 - 10,331,027 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1914,122,332 - 14,142,962 (+)NCBILyon_Normotensive
Lyon_Hypertensive1914,615,226 - 14,635,856 (+)NCBILyon_Hypertensive
F344_StmMcwi1910,162,206 - 10,183,003 (+)NCBIF344_StmMcwi
Rnor_6.01910,731,855 - 10,752,641 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,731,855 - 10,752,641 (+)Ensemblrn6Rnor6.0
Rnor_5.01910,725,892 - 10,746,753 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41910,754,737 - 10,776,134 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1910,204,761 - 10,225,276 (+)NCBICelera
RGSC_v3.11910,759,562 - 10,780,960 (+)NCBI
Cytogenetic Map19p13NCBI
Pllp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543314,896,087 - 14,915,794 (-)Ensembl
ChiLan1.0NW_00495543314,896,087 - 14,915,794 (-)NCBIChiLan1.0ChiLan1.0
PLLP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21866,725,309 - 66,753,980 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11672,646,074 - 72,674,763 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01637,531,102 - 37,559,762 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11656,663,878 - 56,692,784 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1656,663,791 - 56,692,784 (-)EnsemblpanPan2panpan1.1
PLLP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1259,102,689 - 59,125,165 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl259,102,770 - 59,124,614 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha255,731,975 - 55,753,382 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0259,641,500 - 59,663,504 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,641,517 - 59,717,246 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,473,412 - 56,495,146 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,480,400 - 57,502,199 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0258,374,374 - 58,396,245 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pllp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934950,214,238 - 50,235,529 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,353,542 - 9,375,042 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,353,546 - 9,374,826 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLLP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,211,761 - 19,241,228 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1619,214,037 - 19,241,251 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,207,773 - 17,232,191 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLLP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1543,204,815 - 43,232,558 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl543,204,612 - 43,232,380 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604733,087,690 - 33,114,787 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pllp
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1171,562,271 - 1,582,948 (-)NCBIRrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000016387   ⟹   ENSHGLP00000016218
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474628,779,173 - 28,797,638 (+)Ensembl
RefSeq Acc Id: XM_004843172   ⟹   XP_004843229
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474628,779,158 - 28,797,039 (+)NCBI
RefSeq Acc Id: XM_021257018   ⟹   XP_021112677
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474628,779,154 - 28,797,828 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004843229 (Get FASTA)   NCBI Sequence Viewer  
  XP_021112677 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB00652 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000016218
RefSeq Acc Id: XP_021112677   ⟸   XM_021257018
- Peptide Label: isoform X2
- UniProtKB: A0AAX6SSK8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004843229   ⟸   XM_004843172
- Peptide Label: isoform X1
- UniProtKB: G5AUE1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000016218   ⟸   ENSHGLT00000016387


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000011615 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000016387 ENTREZGENE
InterPro MAL UniProtKB/TrEMBL
  Marvel UniProtKB/TrEMBL
  MARVEL-CKLF_proteins UniProtKB/TrEMBL
KEGG Report hgl:101699173 UniProtKB/TrEMBL
NCBI Gene Pllp ENTREZGENE
PANTHER MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  PLASMOLIPIN UniProtKB/TrEMBL
Pfam MARVEL UniProtKB/TrEMBL
PRINTS MALPROTEIN UniProtKB/TrEMBL
PROSITE MARVEL UniProtKB/TrEMBL
UniProt A0AAX6SSK8 ENTREZGENE, UniProtKB/TrEMBL
  G5AUE1 ENTREZGENE, UniProtKB/TrEMBL