Mamld1 (mastermind like domain containing 1) - Rat Genome Database

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Gene: Mamld1 (mastermind like domain containing 1) Heterocephalus glaber
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Symbol: Mamld1
Name: mastermind like domain containing 1
RGD ID: 18912116
Description: INVOLVED IN male gonad development (ortholog); regulation of transcription by RNA polymerase II (ortholog); spermatid differentiation (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); genetic disease (ortholog); hypospadias (ortholog); FOUND IN nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Mastermind-like domain-containing protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624923783,563 - 903,381 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624923783,354 - 903,291 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Mamld1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624923783,563 - 903,381 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624923783,354 - 903,291 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
MAMLD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X150,361,572 - 150,514,173 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX150,361,422 - 150,514,178 (+)Ensemblhg38GRCh38
GRCh37X149,529,839 - 149,682,443 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X149,364,378 - 149,433,104 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34X149,284,287 - 149,353,007NCBI
CeleraX149,780,137 - 149,930,293 (+)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX138,395,371 - 138,540,296 (+)NCBIHuRef
CHM1_1X149,405,878 - 149,556,741 (+)NCBICHM1_1
T2T-CHM13v2.0X148,629,198 - 148,781,835 (+)NCBIT2T-CHM13v2.0
Mamld1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X70,093,642 - 70,199,662 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX70,093,846 - 70,199,662 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38X71,050,036 - 71,156,056 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX71,050,240 - 71,156,056 (+)Ensemblmm10GRCm38
MGSCv37X68,303,431 - 68,407,892 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36X67,310,812 - 67,415,273 (+)NCBIMGSCv36mm8
CeleraX62,025,072 - 62,129,462 (+)NCBICelera
Cytogenetic MapXA7.2NCBI
cM MapX36.33NCBI
Mamld1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554986,215,236 - 6,273,091 (+)NCBIChiLan1.0ChiLan1.0
MAMLD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X150,496,713 - 150,650,656 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X150,500,311 - 150,653,158 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X140,009,726 - 140,163,667 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X149,946,922 - 150,098,418 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX149,945,753 - 150,098,431 (+)EnsemblpanPan2panpan1.1
MAMLD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X118,654,403 - 118,776,603 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX118,655,026 - 118,775,758 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_TashaX104,029,119 - 104,150,998 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0X120,867,624 - 120,989,528 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX120,868,269 - 120,988,683 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X117,593,736 - 117,715,613 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X120,035,880 - 120,157,850 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X119,954,185 - 120,076,087 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mamld1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X116,214,193 - 116,314,464 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367141,951,966 - 2,042,394 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367141,941,974 - 2,042,246 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAMLD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX122,120,300 - 122,234,472 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1X122,120,275 - 122,233,692 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X139,798,663 - 139,849,364 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAMLD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X124,955,942 - 125,093,874 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX125,025,375 - 125,083,319 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606562,647,415 - 62,791,452 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000000364   ⟹   ENSHGLP00000000330
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624923783,563 - 903,381 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000000365   ⟹   ENSHGLP00000000331
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624923783,563 - 903,381 (+)Ensembl
RefSeq Acc Id: XM_004874112   ⟹   XP_004874169
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624923785,865 - 903,291 (+)NCBI
RefSeq Acc Id: XM_004874113   ⟹   XP_004874170
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624923783,355 - 903,291 (+)NCBI
RefSeq Acc Id: XM_021251644   ⟹   XP_021107303
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624923783,355 - 903,291 (+)NCBI
RefSeq Acc Id: XM_021251645   ⟹   XP_021107304
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624923783,354 - 901,335 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004874169 (Get FASTA)   NCBI Sequence Viewer  
  XP_004874170 (Get FASTA)   NCBI Sequence Viewer  
  XP_021107303 (Get FASTA)   NCBI Sequence Viewer  
  XP_021107304 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB18249 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000000331
RefSeq Acc Id: XP_021107304   ⟸   XM_021251645
- Peptide Label: isoform X3
- UniProtKB: A0AAX6SF23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004874170   ⟸   XM_004874113
- Peptide Label: isoform X1
- UniProtKB: A0AAX6QG84 (UniProtKB/TrEMBL),   G5C9N8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021107303   ⟸   XM_021251644
- Peptide Label: isoform X2
- UniProtKB: A0AAX6SFK6 (UniProtKB/TrEMBL),   G5C9N8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004874169   ⟸   XM_004874112
- Peptide Label: isoform X1
- UniProtKB: A0AAX6QG84 (UniProtKB/TrEMBL),   G5C9N8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000000331   ⟸   ENSHGLT00000000365
Ensembl Acc Id: ENSHGLP00000000330   ⟸   ENSHGLT00000000364


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000000314 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000000365 ENTREZGENE
InterPro MAMLD1 UniProtKB/TrEMBL
KEGG Report hgl:101696770 UniProtKB/TrEMBL
NCBI Gene Mamld1 ENTREZGENE
PANTHER CG1 PROTEIN/F18 UniProtKB/TrEMBL
  MASTERMIND-LIKE DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
UniProt A0AAX6QG84 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SF23 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SFK6 ENTREZGENE, UniProtKB/TrEMBL
  G5C9N8 ENTREZGENE, UniProtKB/TrEMBL