PRC1 (protein regulator of cytokinesis 1) - Rat Genome Database

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Pathways
Gene: PRC1 (protein regulator of cytokinesis 1) Chlorocebus sabaeus
Analyze
Symbol: PRC1
Name: protein regulator of cytokinesis 1
RGD ID: 18665280
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (inferred); mitotic spindle midzone assembly (inferred); positive regulation of cell population proliferation (inferred); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN contractile ring (inferred); cytoplasm (inferred); microtubule cytoskeleton (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,866,919 - 8,895,832 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl298,866,969 - 8,894,691 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PRC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,866,919 - 8,895,832 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl298,866,969 - 8,894,691 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
PRC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381590,966,040 - 90,994,535 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1590,966,038 - 90,995,629 (-)Ensemblhg38GRCh38
GRCh371591,509,270 - 91,537,765 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361589,310,272 - 89,338,808 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341589,310,272 - 89,338,808NCBI
Celera1567,918,486 - 67,947,023 (-)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1567,620,243 - 67,648,754 (-)NCBIHuRef
CHM1_11591,350,870 - 91,379,451 (-)NCBICHM1_1
T2T-CHM13v2.01588,725,621 - 88,754,118 (-)NCBIT2T-CHM13v2.0
Prc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,944,224 - 79,966,007 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,944,198 - 79,966,007 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38780,294,445 - 80,316,259 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl780,294,450 - 80,316,259 (+)Ensemblmm10GRCm38
MGSCv37787,439,351 - 87,461,145 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36780,168,030 - 80,189,772 (+)NCBIMGSCv36mm8
Celera777,695,309 - 77,717,026 (+)NCBICelera
Cytogenetic Map7D2NCBI
cM Map745.62NCBI
Prc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,659,312 - 143,681,019 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1143,659,481 - 143,681,012 (+)EnsemblGRCr8
mRatBN7.21134,250,086 - 134,271,765 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1134,250,081 - 134,271,765 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1142,159,077 - 142,180,630 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01149,328,474 - 149,350,028 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,246,366 - 142,267,893 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01142,087,181 - 142,108,746 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1142,087,208 - 142,108,746 (+)Ensemblrn6Rnor6.0
Rnor_5.01143,039,951 - 143,061,006 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41136,112,674 - 136,133,720 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1126,310,372 - 126,331,869 (+)NCBICelera
RGSC_v3.11136,197,141 - 136,212,122 (+)NCBI
Cytogenetic Map1q31NCBI
Prc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541615,023,620 - 15,045,958 (-)Ensembl
ChiLan1.0NW_00495541615,023,620 - 15,045,958 (-)NCBIChiLan1.0ChiLan1.0
PRC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21680,519,893 - 80,550,894 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11584,218,514 - 84,250,664 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01569,659,420 - 69,687,707 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11588,856,316 - 88,884,071 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1588,856,323 - 88,884,071 (-)EnsemblpanPan2panpan1.1
PRC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,252,893 - 53,279,717 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,253,626 - 53,279,211 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha355,890,693 - 55,917,468 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0353,668,946 - 53,695,845 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,669,547 - 53,695,841 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,188,305 - 53,214,980 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,399,528 - 53,426,227 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0353,739,932 - 53,766,713 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Prc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640130,272,662 - 130,300,022 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648316,034,550 - 16,060,909 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648316,034,577 - 16,061,856 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl755,869,821 - 55,900,978 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1755,869,749 - 55,900,640 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Prc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476817,266,964 - 17,288,430 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476817,266,850 - 17,289,051 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Prc1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12119,931,853 - 119,952,852 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in PRC1
658 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007990422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007990440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073013020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JBLKOC010000029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000015176   ⟹   ENSCSAP00000013123
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl298,866,969 - 8,894,691 (+)Ensembl
RefSeq Acc Id: XM_007990422   ⟹   XP_007988613
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,966 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990423   ⟹   XP_007988614
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,966 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990424   ⟹   XP_007988615
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,967 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990425   ⟹   XP_007988616
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,970 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990427   ⟹   XP_007988618
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,966 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990428   ⟹   XP_007988619
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,966 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990429   ⟹   XP_007988620
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,965 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990430   ⟹   XP_007988621
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,967 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990431   ⟹   XP_007988622
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,919 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,006 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990433   ⟹   XP_007988624
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,919 - 8,895,832 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,015 - 37,859,806 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990434   ⟹   XP_007988625
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,968 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990435   ⟹   XP_007988626
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,968 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990436   ⟹   XP_007988627
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,968 - 8,895,288 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,501 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990437   ⟹   XP_007988628
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,968 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,004 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990438   ⟹   XP_007988629
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,968 - 8,895,313 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,006 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990439   ⟹   XP_007988630
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,968 - 8,895,288 (+)NCBI
Vero_WHO_p1.0NW_02366605937,831,501 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007990440   ⟹   XP_007988631
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1298,866,973 - 8,895,172 (+)NCBI
Vero_WHO_p1.0NW_02366605937,832,145 - 37,859,903 (-)NCBI
Sequence:
RefSeq Acc Id: XP_007988622   ⟸   XM_007990431
- Peptide Label: isoform X9
RefSeq Acc Id: XP_007988624   ⟸   XM_007990433
- Peptide Label: isoform X10
RefSeq Acc Id: XP_007988620   ⟸   XM_007990429
- Peptide Label: isoform X7
RefSeq Acc Id: XP_007988618   ⟸   XM_007990427
- Peptide Label: isoform X5
RefSeq Acc Id: XP_007988613   ⟸   XM_007990422
- Peptide Label: isoform X1
RefSeq Acc Id: XP_007988614   ⟸   XM_007990423
- Peptide Label: isoform X2
RefSeq Acc Id: XP_007988619   ⟸   XM_007990428
- Peptide Label: isoform X6
RefSeq Acc Id: XP_007988615   ⟸   XM_007990424
- Peptide Label: isoform X3
RefSeq Acc Id: XP_007988621   ⟸   XM_007990430
- Peptide Label: isoform X8
RefSeq Acc Id: XP_007988629   ⟸   XM_007990438
- Peptide Label: isoform X14
RefSeq Acc Id: XP_007988627   ⟸   XM_007990436
- Peptide Label: isoform X12
RefSeq Acc Id: XP_007988630   ⟸   XM_007990439
- Peptide Label: isoform X13
RefSeq Acc Id: XP_007988626   ⟸   XM_007990435
- Peptide Label: isoform X12
RefSeq Acc Id: XP_007988628   ⟸   XM_007990437
- Peptide Label: isoform X13
RefSeq Acc Id: XP_007988625   ⟸   XM_007990434
- Peptide Label: isoform X11
RefSeq Acc Id: XP_007988616   ⟸   XM_007990425
- Peptide Label: isoform X4
RefSeq Acc Id: XP_007988631   ⟸   XM_007990440
- Peptide Label: isoform X15
- UniProtKB: A0A0D9RWY4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000013123   ⟸   ENSCSAT00000015176


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000017083 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000015176.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1520 UniProtKB/TrEMBL
InterPro MAP65_Ase1_PRC1 UniProtKB/TrEMBL
NCBI Gene PRC1 ENTREZGENE
PANTHER PTHR19321 UniProtKB/TrEMBL
  PTHR19321:SF1 UniProtKB/TrEMBL
Pfam MAP65_ASE1 UniProtKB/TrEMBL
UniProt A0A0D9RWY4 ENTREZGENE, UniProtKB/TrEMBL