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Gene: SLC22A15 (solute carrier family 22 member 15) Chlorocebus sabaeus

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Symbol:

SLC22A15

Name:

solute carrier family 22 member 15

RGD ID:

18551230

Description:

ENCODES a protein that exhibits amino-acid betaine transmembrane transporter activity (inferred); transmembrane transporter activity (inferred); INVOLVED IN amino-acid betaine transport (inferred); transmembrane transport (inferred); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	17,645,511 - 17,808,245 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	17,649,489 - 17,732,538 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	20,345,154 - 20,438,357 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Colorectal Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino-acid betaine transport (IEA)

transmembrane transport (IEA)

Cellular Component

membrane (IEA)

plasma membrane (IEA)

Molecular Function

amino-acid betaine transmembrane transporter activity (IEA)

transmembrane transporter activity (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

SLC22A15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	17,645,511 - 17,808,245 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	17,649,489 - 17,732,538 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	20,345,154 - 20,438,357 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SLC22A15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	115,976,513 - 116,070,054 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	115,976,477 - 116,070,054 (+)	Ensembl			hg38	GRCh38
GRCh37	1	116,519,134 - 116,612,675 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	116,320,642 - 116,413,548 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	116,231,163 - 116,324,068	NCBI
Celera	1	114,747,861 - 114,841,388 (+)	NCBI		Celera
Cytogenetic Map	1	p13.1	NCBI
HuRef	1	114,392,466 - 114,470,555 (+)	NCBI		HuRef
CHM1_1	1	116,633,879 - 116,727,416 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	115,984,504 - 116,078,027 (+)	NCBI		T2T-CHM13v2.0

Slc22a15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	101,763,084 - 101,831,769 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	101,763,092 - 101,831,769 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	101,854,443 - 101,928,220 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	101,855,776 - 101,924,453 (-)	Ensembl			mm10	GRCm38
MGSCv37	3	101,659,691 - 101,728,376 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	101,989,181 - 102,054,259 (-)	NCBI		MGSCv36	mm8
Celera	3	104,067,580 - 104,129,833 (-)	NCBI		Celera
Cytogenetic Map	3	F2.2	NCBI
cM Map	3	44.3	NCBI

Slc22a15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	191,987,409 - 192,049,859 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	191,987,409 - 192,047,362 (-)	Ensembl				GRCr8
mRatBN7.2	2	189,298,836 - 189,359,902 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	189,298,832 - 189,358,792 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	196,931,604 - 196,991,547 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	194,783,864 - 194,843,842 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	189,609,738 - 189,669,733 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	2	191,587,675 - 191,647,840 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	2	191,826,929 - 191,887,095 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	2	191,444,000 - 191,505,976 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	2	191,557,671 - 191,619,635 (-)	NCBI		F344_StmMcwi
Rnor_6.0	2	204,281,638 - 204,344,026 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	204,281,638 - 204,341,676 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	223,715,478 - 223,777,419 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	196,953,291 - 197,013,763 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	181,732,924 - 181,792,876 (-)	NCBI		Celera
RGSC_v3.1	2	196,917,484 - 196,998,777 (-)	NCBI
Cytogenetic Map	2	q34	NCBI

Slc22a15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	19,183,832 - 19,262,041 (+)	Ensembl
ChiLan1.0	NW_004955435	19,183,832 - 19,260,412 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC22A15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	108,624,455 - 108,718,738 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	108,224,765 - 108,318,069 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	86,497,379 - 86,591,157 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	121,546,807 - 121,625,147 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	121,547,438 - 121,628,151 (-)	Ensembl			panPan2	panpan1.1

SLC22A15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	53,471,790 - 53,539,488 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	53,476,041 - 53,537,573 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	53,106,735 - 53,187,917 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	54,338,639 - 54,419,951 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	54,338,686 - 54,417,942 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	53,377,726 - 53,459,032 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	53,413,039 - 53,494,576 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	53,985,758 - 54,067,070 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slc22a15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	13,193,496 - 13,251,292 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936627	1,240,385 - 1,295,099 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936627	1,237,714 - 1,295,639 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC22A15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	104,664,015 - 104,755,672 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	104,662,844 - 104,755,667 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

Slc22a15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	11,740,766 - 11,809,979 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624772	11,740,843 - 11,811,790 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Slc22a15
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	56,146,523 - 56,212,625 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in SLC22A15
4451 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007977444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007977445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007977446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073008452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005240351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005240352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000016843 ⟹ ENSCSAP00000016341

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	20	17,649,489 - 17,732,538 (-)	Ensembl

RefSeq Acc Id:

XM_007977444 ⟹ XP_007975635

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	17,646,548 - 17,808,243 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	20,345,795 - 20,438,351 (-)	NCBI

Sequence:

show sequence

GTGAGGCTATACATTTTTTCTTTGTTTGCAAATAGCCAGATTTTTCAACAGATTTGCACGTACT
GTGTCTTGATGTTAAATTGGACAACATTTTTTAAAAAGGCAATGAGAGGATTTGGTGCTGGAGA
AATTCATTCATAAGCCTGGCGTATTCAGAACACTGAGGAATTGTTGGACTGAAGAGCCTTTTCT
GACATCCTCATTTGTTCTGCTGTGTAATAGCATGGAATCTTTCAGAGCTGTCGACATCTGCTCC
ACTCTAGAGAGCTGCAGAACCAAGCCAGCAGAGCAATAATAATTATGCCCGAATGGACTGAAAA
GGATGCAAGAGACGAGAAGGAAGACAAGGAAAAATACACCCAGTGCGATGATGTTCGAACCTGA
AGTCCAGAGGCCCGGGTCCAGGGCATCCAGCGCCGGATCTCGAACGCCCTCCTCGCCCCTCGCC
CCGCGTCGCCCGGCTCCGCTCCCCGCCCCGCGTCCACCGCTGGAGCCTGACAGCCCCGCCACCC
GCGCAGGCGCCCCGCCCCGGCCCGCCCCGGCCCCGCCGCCCGCGCTCCCATCCCCGCCCCGGCG
GGTCAGAGCCGGTGCCGGGCGCCCAGGGGTTGCCGCGCCGGGCGGGAGGGCCGCGCCTGAGCGG
GCGGCGGGGTCGCGGGGTTCCTGCGCGCGGCCCGCCATGGAGGTGGAGGAGGCGTTCCAGGCGG
TGGGGGAGATGGGCATCTACCAGATGTACTTGTGCTTCCTGCTGGCCGTGCTGCTGCAGCTCTA
TGTGGCCACGGAGGCCATCCTCATTGCACTGGTTGGGGCCACGCCATCGTACCACTGGGACCTG
GCAGAGCTCCTGCCAAATCAGAGCCACGGTAACCAGTCAGCTGGTGAAGACCAGGCCTTTGGGG
ACTGGCTCCTGACAGCCAATGGCAGTGAGATCCATAAGCATGTGCATTTCAGCAGCAGCTTCAC
CTCCATTGCCTCAGAGTGGTTTTTAATTGCCAACAGATCCTACAAAGTCAGTGCAGCAAGCTCT
TTTTTCTTCAGTGGTGTATTTGTTGGAGTTATCTCTTTTGGTCAGCTTTCAGATCGCTTCGGAA
GGAAAAAAGTCTATCTCACAGGTTTTGCTCTTGACATCTTATTTGCAATTGCAAATGGATTTTC
CCCCTCATATGAGTTCTTTGCAATAACTCGCTTCCTGGTGGGCATGATGAATGGAGGGATGTCG
CTGGTGGCCTTTGTCTTGCTTAATGAATGTGTGGGCACCGCCTACTGGGCACTTGCAGGATCGA
TTGGCGGCCTCTTCTTTGCAGTTGGCATTGCCCAATATGCCCTGTTAGGATACTTCATCCGCTC
CTGGAGGACCCTAGCCGTTCTGGTTAACCTGCAGGGAACAGTGGTCTTTCTCTTGTCTTTATTC
ATTCCTGAATCACCTCGTTGGTTATACTCCCAGGGTCGACTGAGTGAGGCTGAAGAGGCGCTGT
ACCTCATTGCCAAGAGGAACCGCAAGCTCAAGTGCACATTCTCACTAACCCACCCCGCCAACAG
GAGCTGCAGGGAGACTGGAAGTTTCCTGGATCTGTTTCGTTACCGAGTCCTCTTAGGACACACT
TTGATCCTGATGTTCATCTGGTTTGTGTGCAGCTTGGTGTATTATGGCCTAACTCTGAGTGCGG
GTGATCTAGGTGGAAGTATTTATGCCAACCTGGCCCTGTCTGGCCTCATAGAGATTCCATCTTA
CCCTCTCTGTATCTACTTGATTAACCAAAAATGGTTTGGTCGGAAGCGAACATTATCAGCATTT
CTGTGCCTAGGAGGACTGGCTTGTCTTATTGTAATGTTTCTTCCAGAAAAAAAAGACACAGGTG
TGTTTGCAGTGGTGAACAGCCATTCCTTGTCCTTGCTGGGGAAGCTGACCATCAGTGCTGCCTT
TAACATTGTTTATATCTACACCTCTGAGCTTTACCCTACAGTCATCAGGAATGTTGGGCTTGGA
ACTTGTTCCATGTTCTCCCGAGTTGGTGGGATTATTGCTCCCTTCATCCCCTCACTGAAATATG
TGCAATGGTCTTTACCATTCATTGTCTTCGGAGCCACTGGCCTGATCTCTGGCCTCCTGAGTTT
GTTGTTGCCAGAAACCGTTAACAGTCCGCTGCTAGAAACATTCTCCGACCTTCAGGTGTATTCG
TATCGCAGGCTGGGAGAAGAAGCATTATCTTTACAGGCCTTGGACCCTCCACAGTGTGTGGACA
AGGAGAGTTCTTTAGGGAGCGAGAGTGAGGAAGAGGAAGAATTTTACGATGCAGATGAAGAGAC
TCAGATGATCAAGTGAAGAGCCCCAGATTCCCCCTAAGAAGCAAAGGATCATCTTTTATGCCTC
TGGCTAAGGCAGGTTCTTCCATGAATATTAAGAGAGTTGTAAAAAGAGAGGCTTGGCTTGAACA
TACATAGATGGTACCCGGCGTGGACTGATGTTTTTAGGCACAGAAGTTGGAGAAGAGATTTCGT
GAGAGGCAACATCACTGCATTGAGAGAATAGTTGTTAATTTGTTTAGAATTTAAGTTCTGCTCA
GAATCATAACATCTGGCAGAGCAGCCCAAACCCACATGCCAAAGTGGTAGGCTCATTTGTTTCT
AGAGGTTTCATAATGTTGCTTTTCCTTCATCATGATCTAAATAAAGGCAGATATGTAAAACTTC
TCACTATTTTGGTGGGGTAAGATAAGCTATCCTTAAGATTTAATCTTTATACCATGTTGGACAT
TTGCCCCTATCAGTTGCTACTCAGGAATCTTCTGGTACAGGTGGTTAACATCAACATTTTAATT
TTGTGTCCAGGAAAAAGCACCCAGAGGTCATCTATGTGTCCCGAGACCCTTCAGCTTTTTCTCA
GCTGATGAAATAAGAGTCCTCAGCTTGGTTCCCAGCCTGCTGGTTGACTTGGGCTCCTCATGCC
TTGAGTCCCACAGATGATTCATTAGGAAAAGCCAGAGGTACCAAAGTGGTTTACTCAGAGTCAG
GAGTGTAGCTCTGGCTGCCTGTCAGCTCCCTTGGATACTACAGTGTGTGATTTCTTCCTTTCCC
ACTAATACGCACATCCAGAAAAATTTCCATCTGAGATTCTGGTACTTCAAAATCATGAATAGTA
AATGAGAAAGCTTTAAGTAGAGGGCAGTTAAACAGTGACATGTTGAGCACCTGGAGGGAAAAAA
AAGGTGCAGTTTTTAATAATGGAGAAAATGAAATTATCTTTGATAAATTTTTATTTGTGTTGTT
TTCAGTATTGTGCCATGAAGGATTTGGACAATATTTAAGAACTTGTCCTAGATCAGCCCCGACC
TGTTTAATCAGAATGGAAGGTTCAGTAATTTCACAGGAAATGTTGGTTTTTCATTAAGTGCTAC
CAACTTTCAAGTGAATCTTACATTTGATTTCCTGAAATCATGTCTTGAAAACATGTTTTCCCAT
GAAACTTGAATACTATCTCAAATAGGAATATAAACCTAGAGTCAACAAGCTTAGGCAGCACTGA
TTTAGGTCACTTTCCCAATGAGGAAAATTTCTGTGTTTTCAGAATTTCCATTTCTGCTAACCTC
TTGGAGAAAAAGAAATTGAATTAGAGGTAAATAGAAGACGTCACTGTGGCTGCTTCTGGAAGTG
CTGGAAACATCACCCCAATTGGCTCCAAATACTGTCATGTTTTCTTGTACATTGACTTCTGGTT
TCCACTGTATCAGTGTGTACCTTTGTAATTGTTATTTTTATGTCTTTTATGCCCTTGATTATTA
ATTGGGCTCTTCATAAACAGAGGCCATCTCTACTACTGTTTATTTTTCTCTGCTGTGCCCAGAA
CATTGGCCTAGACTTAGTAAGACCTAGTAAATATTACTGTTTCTAGCCATCAGAGAGATTGTGG
AACTCCTCCCAGTATAACTTTTGCAAACTCCAGGCAAATCTGACCCAAACTCCCAAATTGTCAA
ATCCTGCTTAACTTTCTCTGGAAAATAGACACCTTCTCAACATCAGAATAGGAAGAGAGGAAGA
ACTTACAAAGACATTTAAACGTTCTTCTTAAATGGTGGTTGGGCATTTAAAACACTGAACTAAC
ATATACATAATTTTTGATTAGTTGGAGCTTTATTTGTATTATAAGAGTAATATATCTCATTACA
GAAAATTTGGAAACTAGAAATTAAAAAATGTATCACCCATACGTCCAACATCGAGAGAAAATCA
GTGTTACGGCTTTGTTCCATTTGAAGATCAATTGGGAGTGCATCTCTCTATTGGCACTGGGTTC
GATTGCCTCTGGCTAATAGAGTTCAATTAGTTCTATCCCTGGGTTTCCTTTCTTAGCTGTGGGG
TGGAAGATAGGAGGGAGAAATCTACAATTTGAATACATGTTACTTAATAAGGCTCGGCTGGCCA
TCAGTTCCTTATGTCAGATATGTCATTAAATTTTTTTTCTAGATGGTCCTTGAGCAAAACTTAA
TAATTACTTTTTTTTATTTCCACTGCCTTTATAAAATCAAAATTTCCTCCTTTTGATAATAACT
GTTGAATACTATTGATGTAGAGAATGTGTACATGTGTATATTTGCATTGATTAAATTATTGGAA
AACTTTTCATTGATAGGTAATGTATTTTGATTGTGCAGGTGGTTTGTAAAAAGTATCCTTTTTT
TATTCTATTCAAAATTAAATTTTTTTCTCCTAAAATAAAGCAAGAAAAGTAAATGTAAGATATA
TAAGAAACCCTAGAGTTTCCAGGGTGAAAGTTCTCATTAGCAGCTTGTTCAAAACATTTACATC
ACACAAATATTTTGAAAGAAACCATGTTGAAATTGTCTGAGTTTGTAAGTTATAACCACAGCCC
AGTAAAACCAATACTTGTTATTTGGCTTTTTCCAAGCAATGCAGATATTCTTTAGTATTTAAAA
ATGAGCAAATAAACAAAATGAGGCAAATAAATGAAGAAAATGAGTTTCTGAGGCACTGCTTAAG
TGACCATAAATCAGACACATATTTTTATGGTGGGCAAATTGATGAAGATACTTTTAGTAAGTGA
TTTATATTCATAACAAATACATCTTGAAATAATGTCACTGCTGTATCAGAATTTTAAAATAGCC
TCATGTTAGGACTTCTCCATACAAATTCTTTATCATTGGTTCTTAAATTGGAAAAGTACCTATA
AATGATTACATTTTTTAACTAAATAAAATGCAGATATTTTGGCTTCTTGTAAATTTAATAAAGA
ATCATAAAACATA

hide sequence

RefSeq Acc Id:

XM_007977446 ⟹ XP_007975637

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	17,646,548 - 17,808,243 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	20,345,795 - 20,438,353 (-)	NCBI

Sequence:

show sequence

GTGAGGCTATACATTTTTTCTTTGTTTGCAAATAGCCAGATTTTTCAACAGATTTGCACGTACT
GTGTCTTGATGTTAAATTGGACAACATTTTTTAAAAAGGCAATGAGAGGATTTGGTGCTGGAGA
AATTCATTCATAAGCCTGGCGTATTCAGAACACTGAGGAATTGTTGGACTGAAGAGCCTTTTCT
GACATCCTCATTTGTTCTGCTGTGTAATAGCATGGAATCTTTCAGAGCTGTCGACATCTGCTCC
ACTCTAGAGAGCTGCAGAACCAAGCCAGCAGAGCAATAATAATTATGCCCGAATGGACTGAAAA
GGATGCAAGAGACGAGAAGGAAGACAAGGAAAAATACACCCAGTGCGATGATGTTCGAACCTGA
AGTCCAGAGGCCCGGGTCCAGGGCATCCAGCGCCGGATCTCGAACGCCCTCCTCGCCCCTCGCC
CCGCGTCGCCCGGCTCCGCTCCCCGCCCCGCGTCCACCGCTGGAGCCTGACAGCCCCGCCACCC
GCGCAGGCGCCCCGCCCCGGCCCGCCCCGGCCCCGCCGCCCGCGCTCCCATCCCCGCCCCGGCG
GGTCAGAGCCGGTGCCGGGCGCCCAGGGGTTGCCGCGCCGGGCGGGAGGGCCGCGCCTGAGCGG
GCGGCGGGGTCGCGGGGTTCCTGCGCGCGGCCCGCCATGGAGGTGGAGGAGGCGTTCCAGGCGG
TGGGGGAGATGGGCATCTACCAGATGTACTTGTGCTTCCTGCTGGCCGTGCTGCTGCAGTGGTT
TTTAATTGCCAACAGATCCTACAAAGTCAGTGCAGCAAGCTCTTTTTTCTTCAGTGGTGTATTT
GTTGGAGTTATCTCTTTTGGTCAGCTTTCAGATCGCTTCGGAAGGAAAAAAGTCTATCTCACAG
GTTTTGCTCTTGACATCTTATTTGCAATTGCAAATGGATTTTCCCCCTCATATGAGTTCTTTGC
AATAACTCGCTTCCTGGTGGGCATGATGAATGGAGGGATGTCGCTGGTGGCCTTTGTCTTGCTT
AATGAATGTGTGGGCACCGCCTACTGGGCACTTGCAGGATCGATTGGCGGCCTCTTCTTTGCAG
TTGGCATTGCCCAATATGCCCTGTTAGGATACTTCATCCGCTCCTGGAGGACCCTAGCCGTTCT
GGTTAACCTGCAGGGAACAGTGGTCTTTCTCTTGTCTTTATTCATTCCTGAATCACCTCGTTGG
TTATACTCCCAGGGTCGACTGAGTGAGGCTGAAGAGGCGCTGTACCTCATTGCCAAGAGGAACC
GCAAGCTCAAGTGCACATTCTCACTAACCCACCCCGCCAACAGGAGCTGCAGGGAGACTGGAAG
TTTCCTGGATCTGTTTCGTTACCGAGTCCTCTTAGGACACACTTTGATCCTGATGTTCATCTGG
TTTGTGTGCAGCTTGGTGTATTATGGCCTAACTCTGAGTGCGGGTGATCTAGGTGGAAGTATTT
ATGCCAACCTGGCCCTGTCTGGCCTCATAGAGATTCCATCTTACCCTCTCTGTATCTACTTGAT
TAACCAAAAATGGTTTGGTCGGAAGCGAACATTATCAGCATTTCTGTGCCTAGGAGGACTGGCT
TGTCTTATTGTAATGTTTCTTCCAGAAAAAAAAGACACAGGTGTGTTTGCAGTGGTGAACAGCC
ATTCCTTGTCCTTGCTGGGGAAGCTGACCATCAGTGCTGCCTTTAACATTGTTTATATCTACAC
CTCTGAGCTTTACCCTACAGTCATCAGGAATGTTGGGCTTGGAACTTGTTCCATGTTCTCCCGA
GTTGGTGGGATTATTGCTCCCTTCATCCCCTCACTGAAATATGTGCAATGGTCTTTACCATTCA
TTGTCTTCGGAGCCACTGGCCTGATCTCTGGCCTCCTGAGTTTGTTGTTGCCAGAAACCGTTAA
CAGTCCGCTGCTAGAAACATTCTCCGACCTTCAGGTGTATTCGTATCGCAGGCTGGGAGAAGAA
GCATTATCTTTACAGGCCTTGGACCCTCCACAGTGTGTGGACAAGGAGAGTTCTTTAGGGAGCG
AGAGTGAGGAAGAGGAAGAATTTTACGATGCAGATGAAGAGACTCAGATGATCAAGTGAAGAGC
CCCAGATTCCCCCTAAGAAGCAAAGGATCATCTTTTATGCCTCTGGCTAAGGCAGGTTCTTCCA
TGAATATTAAGAGAGTTGTAAAAAGAGAGGCTTGGCTTGAACATACATAGATGGTACCCGGCGT
GGACTGATGTTTTTAGGCACAGAAGTTGGAGAAGAGATTTCGTGAGAGGCAACATCACTGCATT
GAGAGAATAGTTGTTAATTTGTTTAGAATTTAAGTTCTGCTCAGAATCATAACATCTGGCAGAG
CAGCCCAAACCCACATGCCAAAGTGGTAGGCTCATTTGTTTCTAGAGGTTTCATAATGTTGCTT
TTCCTTCATCATGATCTAAATAAAGGCAGATATGTAAAACTTCTCACTATTTTGGTGGGGTAAG
ATAAGCTATCCTTAAGATTTAATCTTTATACCATGTTGGACATTTGCCCCTATCAGTTGCTACT
CAGGAATCTTCTGGTACAGGTGGTTAACATCAACATTTTAATTTTGTGTCCAGGAAAAAGCACC
CAGAGGTCATCTATGTGTCCCGAGACCCTTCAGCTTTTTCTCAGCTGATGAAATAAGAGTCCTC
AGCTTGGTTCCCAGCCTGCTGGTTGACTTGGGCTCCTCATGCCTTGAGTCCCACAGATGATTCA
TTAGGAAAAGCCAGAGGTACCAAAGTGGTTTACTCAGAGTCAGGAGTGTAGCTCTGGCTGCCTG
TCAGCTCCCTTGGATACTACAGTGTGTGATTTCTTCCTTTCCCACTAATACGCACATCCAGAAA
AATTTCCATCTGAGATTCTGGTACTTCAAAATCATGAATAGTAAATGAGAAAGCTTTAAGTAGA
GGGCAGTTAAACAGTGACATGTTGAGCACCTGGAGGGAAAAAAAAGGTGCAGTTTTTAATAATG
GAGAAAATGAAATTATCTTTGATAAATTTTTATTTGTGTTGTTTTCAGTATTGTGCCATGAAGG
ATTTGGACAATATTTAAGAACTTGTCCTAGATCAGCCCCGACCTGTTTAATCAGAATGGAAGGT
TCAGTAATTTCACAGGAAATGTTGGTTTTTCATTAAGTGCTACCAACTTTCAAGTGAATCTTAC
ATTTGATTTCCTGAAATCATGTCTTGAAAACATGTTTTCCCATGAAACTTGAATACTATCTCAA
ATAGGAATATAAACCTAGAGTCAACAAGCTTAGGCAGCACTGATTTAGGTCACTTTCCCAATGA
GGAAAATTTCTGTGTTTTCAGAATTTCCATTTCTGCTAACCTCTTGGAGAAAAAGAAATTGAAT
TAGAGGTAAATAGAAGACGTCACTGTGGCTGCTTCTGGAAGTGCTGGAAACATCACCCCAATTG
GCTCCAAATACTGTCATGTTTTCTTGTACATTGACTTCTGGTTTCCACTGTATCAGTGTGTACC
TTTGTAATTGTTATTTTTATGTCTTTTATGCCCTTGATTATTAATTGGGCTCTTCATAAACAGA
GGCCATCTCTACTACTGTTTATTTTTCTCTGCTGTGCCCAGAACATTGGCCTAGACTTAGTAAG
ACCTAGTAAATATTACTGTTTCTAGCCATCAGAGAGATTGTGGAACTCCTCCCAGTATAACTTT
TGCAAACTCCAGGCAAATCTGACCCAAACTCCCAAATTGTCAAATCCTGCTTAACTTTCTCTGG
AAAATAGACACCTTCTCAACATCAGAATAGGAAGAGAGGAAGAACTTACAAAGACATTTAAACG
TTCTTCTTAAATGGTGGTTGGGCATTTAAAACACTGAACTAACATATACATAATTTTTGATTAG
TTGGAGCTTTATTTGTATTATAAGAGTAATATATCTCATTACAGAAAATTTGGAAACTAGAAAT
TAAAAAATGTATCACCCATACGTCCAACATCGAGAGAAAATCAGTGTTACGGCTTTGTTCCATT
TGAAGATCAATTGGGAGTGCATCTCTCTATTGGCACTGGGTTCGATTGCCTCTGGCTAATAGAG
TTCAATTAGTTCTATCCCTGGGTTTCCTTTCTTAGCTGTGGGGTGGAAGATAGGAGGGAGAAAT
CTACAATTTGAATACATGTTACTTAATAAGGCTCGGCTGGCCATCAGTTCCTTATGTCAGATAT
GTCATTAAATTTTTTTTCTAGATGGTCCTTGAGCAAAACTTAATAATTACTTTTTTTTATTTCC
ACTGCCTTTATAAAATCAAAATTTCCTCCTTTTGATAATAACTGTTGAATACTATTGATGTAGA
GAATGTGTACATGTGTATATTTGCATTGATTAAATTATTGGAAAACTTTTCATTGATAGGTAAT
GTATTTTGATTGTGCAGGTGGTTTGTAAAAAGTATCCTTTTTTTATTCTATTCAAAATTAAATT
TTTTTCTCCTAAAATAAAGCAAGAAAAGTAAATGTAAGATATATAAGAAACCCTAGAGTTTCCA
GGGTGAAAGTTCTCATTAGCAGCTTGTTCAAAACATTTACATCACACAAATATTTTGAAAGAAA
CCATGTTGAAATTGTCTGAGTTTGTAAGTTATAACCACAGCCCAGTAAAACCAATACTTGTTAT
TTGGCTTTTTCCAAGCAATGCAGATATTCTTTAGTATTTAAAAATGAGCAAATAAACAAAATGA
GGCAAATAAATGAAGAAAATGAGTTTCTGAGGCACTGCTTAAGTGACCATAAATCAGACACATA
TTTTTATGGTGGGCAAATTGATGAAGATACTTTTAGTAAGTGATTTATATTCATAACAAATACA
TCTTGAAATAATGTCACTGCTGTATCAGAATTTTAAAATAGCCTCATGTTAGGACTTCTCCATA
CAAATTCTTTATCATTGGTTCTTAAATTGGAAAAGTACCTATAAATGATTACATTTTTTAACTA
AATAAAATGCAGATATTTTGGCTTCTTGTAAATTTAATAAAGAATCATAAAACATA

hide sequence

RefSeq Acc Id:

XM_037998049 ⟹ XP_037853977

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	20,369,484 - 20,438,357 (-)	NCBI

RefSeq Acc Id:

XR_005240351

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	20,345,154 - 20,438,355 (-)	NCBI

RefSeq Acc Id:

XR_005240352

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	20,345,154 - 20,438,355 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007975635	(Get FASTA)	NCBI Sequence Viewer
	XP_007975637	(Get FASTA)	NCBI Sequence Viewer
	XP_037853977	(Get FASTA)	NCBI Sequence Viewer
	XP_072864553	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000016341.1

RefSeq Acc Id:	XP_007975637 ⟸ XM_007977446
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007975635 ⟸ XM_007977444
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9S652 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000016341 ⟸ ENSCSAT00000016843

RefSeq Acc Id:	XP_037853977 ⟸ XM_037998049
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000001686	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000016843.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.20	UniProtKB/TrEMBL
InterPro	MFS_dom	UniProtKB/TrEMBL
	MFS_sugar_transport-like	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
NCBI Gene	SLC22A15	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	UniProtKB/TrEMBL
Pfam	Sugar_tr	UniProtKB/TrEMBL
PROSITE	MFS	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103473	UniProtKB/TrEMBL
UniProt	A0A0D9S652	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD