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Gene: KBTBD11 (kelch repeat and BTB domain containing 11) Chlorocebus sabaeus

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Symbol:

KBTBD11

Name:

kelch repeat and BTB domain containing 11

RGD ID:

18543006

Description:

ASSOCIATED WITH hepatocellular carcinoma (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

artemin-like; kelch repeat and BTB domain-containing protein 11; LOC103215277

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	1,634,347 - 1,661,024 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	1,661,172 - 1,663,043 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666054	43,531,837 - 43,563,867 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hepatocellular carcinoma (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

KBTBD11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	1,634,347 - 1,661,024 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	1,661,172 - 1,663,043 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666054	43,531,837 - 43,563,867 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

KBTBD11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	1,973,677 - 2,006,936 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	1,973,677 - 2,006,937 (+)	Ensembl			hg38	GRCh38
GRCh37	8	1,921,843 - 1,955,102 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	1,909,451 - 1,942,509 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	8	1,864,864 - 1,897,747 (+)	NCBI		Celera
Cytogenetic Map	8	p23.3	NCBI
HuRef	8	1,764,521 - 1,771,207 (+)	NCBI		HuRef
CHM1_1	8	1,921,731 - 1,954,791 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	1,749,730 - 1,785,512 (+)	NCBI		T2T-CHM13v2.0

Kbtbd11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	15,059,408 - 15,083,333 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	15,061,025 - 15,083,333 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	15,011,025 - 15,033,333 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	15,011,025 - 15,033,333 (+)	Ensembl			mm10	GRCm38
MGSCv37	8	15,011,025 - 15,033,333 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	15,024,296 - 15,033,310 (+)	NCBI		MGSCv36	mm8
MGSCv36	8	15,033,940 - 15,042,954 (+)	NCBI		MGSCv36	mm8
Celera	8	15,175,335 - 15,198,674 (+)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	7.59	NCBI

Kbtbd11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	81,318,596 - 81,340,334 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	81,313,093 - 81,340,390 (-)	Ensembl				GRCr8
mRatBN7.2	16	74,618,291 - 74,638,010 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	74,615,792 - 74,637,736 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	79,896,353 - 79,900,451 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	83,349,924 - 83,354,022 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	78,599,383 - 78,603,481 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	16	81,264,673 - 81,268,773 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	16	82,626,705 - 82,630,803 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	16	83,127,689 - 83,131,787 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	16	79,321,350 - 79,325,451 (-)	NCBI		F344_StmMcwi
Rnor_6.0	16	79,696,395 - 79,716,129 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	79,696,891 - 79,700,992 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	79,273,008 - 79,292,584 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	79,428,762 - 79,432,863 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	72,436,737 - 72,440,838 (-)	NCBI		Celera
Cytogenetic Map	16	q12.5	NCBI

Kbtbd11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955403	57,796,246 - 57,818,666 (-)	NCBI	ChiLan1.0	ChiLan1.0

KBTBD11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	16,715,732 - 16,748,654 (+)	NCBI		NHGRI_mPanPan1-v2
Mhudiblu_PPA_v0	8	5,334,954 - 5,368,004 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

KBTBD11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	16	49,804,661 - 49,810,164 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	61,849,930 - 61,855,443 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	16	54,444,408 - 54,449,919 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	59,758,325 - 59,763,747 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	60,142,278 - 60,147,781 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kbtbd11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	1,116,809 - 1,136,266 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936615	1,130,826 - 1,132,754 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936615	1,120,512 - 1,127,488 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KBTBD11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	33,494,430 - 33,497,201 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	33,487,439 - 33,501,274 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	38,032,678 - 38,051,131 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Kbtbd11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624861	1,101,415 - 1,103,340 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624861	1,085,143 - 1,111,528 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Kbtbd11
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	68,794,950 - 68,799,405 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in KBTBD11
760 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007961593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037985345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037985346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037985347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073017917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073017918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073017919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073017920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000018604 ⟹ ENSCSAP00000018053

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	8	1,661,172 - 1,663,043 (+)	Ensembl

RefSeq Acc Id:

XM_007961593 ⟹ XP_007959784

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	1,634,347 - 1,661,024 (+)	NCBI
Vero_WHO_p1.0	NW_023666054	43,531,837 - 43,563,866 (+)	NCBI

Sequence:

show sequence

ATAGATTTTTAACCACTAAATATGTCAACAACGCATCGCCTCTACTTTTACCAAAAAATAGGCG
CACAAAACTCCCCTGTTTGCGCCCGCGGGCACCTGTCTCCGCCTCCTCGCAGGAAGCGGCCCCC
GCGCGTGGGCTCGGGCTCGGGTAGGGGCGTGGGCCGCGGTCCCGGAAGGGGTGAAGCGCCCGGC
GGGCGGGCGCGGGGCAGGGAGGCCCGGGGGGAGCCACAGCCGCTCCGCAGCCGGTCCGCAGACC
CGGCCAGGCGGCGCGCGCCCGAGAACGCCCCGTGTGCACGCGCCCGCCCCCCTCCCCGCACCCC
GCGCGCGCCCCTCGCAGCCGGGAGCCGGAGCGCTGGCTCCGCGCGGCCTGGAGAGGCGGAGAGG
CCGGTCCGCCGCCCCCTCTGCCGCCCACGCCCCGCTGCGGGTCGGAGGAGCAGGAGCGCTCGCA
GGTGCTCGGAGAGGCCGGGCCGCGGCTCCCACAGGTGCCGGGAGGAGGCCGCGCGCATGCGCCG
GAGCCCACCCGCCAGGCTGCGCGTCCCGGGCCCGGGTGCTGAAGAGGAGCCGCGGCGAGGAACA
AGAGAATGGTGAGAGGACGCGGAAACACCTGATATCCCAGCAAAGGAAGCTGCAGAGGAAGGGT
CCTGCCCCGTGAGCAAGGACGGCCTCCAGGAGCACAGCGGCTTCTCCTGACACCCCCCGGCAGT
GAATTACAGATGACCCCGTATATGGGGAGGTGCGGACACCGACACACTGGGAGAGCTCCTGAGA
CCAGCGCGCAGGACCAGTGTCCTCCCCGTGACCTTGCAGTTGTGTAGCCACAAGTGGGAGCCAC
AAAGGAGGAGAGCCCACAGGGGGACTCTTTTCAAGACATGGGGTTAAATCGGGGCTCTGAAGTT
GGGGCCACAGCCGATCTCAGCTTTCTGCGTCCTGGGGGTGCGGTGATATGATGGAATGTGAAGT
GAGTGGGTGAGCACGGACTCCTGAAAGGGCGCACCAGATACCTGGTTATCCGCTACTGCAGAGA
GACACCTGGTCAGCCGGCGTTGCAGAGAGGGGCAGCTAGTCACTCAGACTGCAGAGAGAGACAC
CTGGTCAGCCGGCGTTGCAGAGAGGGGCAGCTAGTCACTCAGACTGCAGAGAGAGACACCTGGT
CAGGCAGGCTGCACAGAGACACACCTTGTCACCCAGGCTGCAGAAACCGCCACAGTCAACTGCA
GCTCCAGTCAGTGCTGTATGTTGGCTGATGTGGTCTTGCACCGGCTGGAGATCCATTCACCAAG
ACTTTCTGGGAAGATTTAAAGTGACTGGGGTTCAGAAGTTCAGCAAGAGTTGGACACACCCCTC
CTCACTGGAGAGGAGAGGGGAAAGGCGGGGGATGGGGATCAGCGTGTGAGATTCCCCCCCTCAC
ACACACACACACACACACAC

hide sequence

RefSeq Acc Id:

XM_037985345 ⟹ XP_037841273

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666054	43,531,845 - 43,563,866 (+)	NCBI

RefSeq Acc Id:

XM_037985346 ⟹ XP_037841274

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666054	43,553,784 - 43,563,867 (+)	NCBI

RefSeq Acc Id:

XM_037985347 ⟹ XP_037841275

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666054	43,547,356 - 43,563,867 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007959784	(Get FASTA)	NCBI Sequence Viewer
	XP_037841273	(Get FASTA)	NCBI Sequence Viewer
	XP_037841275	(Get FASTA)	NCBI Sequence Viewer
	XP_072874018	(Get FASTA)	NCBI Sequence Viewer
	XP_072874019	(Get FASTA)	NCBI Sequence Viewer
	XP_072874020	(Get FASTA)	NCBI Sequence Viewer
	XP_072874021	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000018053.1

RefSeq Acc Id:	XP_007959784 ⟸ XM_007961593
- UniProtKB:	A0A0D9SB14 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000018053 ⟸ ENSCSAT00000018604

RefSeq Acc Id:	XP_037841273 ⟸ XM_037985345
- UniProtKB:	A0A0D9SB14 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037841275 ⟸ XM_037985347
- UniProtKB:	A0A0D9SB14 (UniProtKB/TrEMBL)

RefSeq Acc Id:

XP_037841274 ⟸ XM_037985346

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000018514	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000018604.1	UniProtKB/TrEMBL
Gene3D-CATH	2.120.10.80	UniProtKB/TrEMBL
	Potassium Channel Kv1.1, Chain A	UniProtKB/TrEMBL
InterPro	BTB/POZ_dom	UniProtKB/TrEMBL
	Kelch-typ_b-propeller	UniProtKB/TrEMBL
	Kelch/BTB_domain_protein	UniProtKB/TrEMBL
	Kelch_1	UniProtKB/TrEMBL
	SKP1/BTB/POZ_sf	UniProtKB/TrEMBL
KEGG Report	csab:103215276	UniProtKB/TrEMBL
NCBI Gene	LOC103215277	ENTREZGENE
PANTHER	BTB_2 DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 11	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	Kelch_1	UniProtKB/TrEMBL
PROSITE	BTB	UniProtKB/TrEMBL
SMART	BTB	UniProtKB/TrEMBL
	Kelch	UniProtKB/TrEMBL
Superfamily-SCOP	SSF117281	UniProtKB/TrEMBL
	SSF54695	UniProtKB/TrEMBL
UniProt	A0A0D9SB14	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-12-08	KBTBD11	kelch repeat and BTB domain containing 11	LOC103215277	artemin-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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