Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | genetic disease | | ISO | GOLM1 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Inborn genetic diseases | ClinVar | | |
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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | genetic disease | | ISO | GOLM1 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Inborn genetic diseases | ClinVar | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | External validation of genetically predicted protein biomarkers for pancreatic cancer risk using aptamer-based plasma levels: A prospective analysis in the Atherosclerosis Risk in Communities Study. | Liu T, etal., Int J Cancer. 2023 Sep 15;153(6):1201-1216. doi: 10.1002/ijc.34624. Epub 2023 Jun 20. |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
4. | GOLM1 Stimulation of Glutamine Metabolism Promotes Osteoporosis via Inhibiting Osteogenic Differentiation of BMSCs. | Shen G, etal., Cell Physiol Biochem. 2018;50(5):1916-1928. doi: 10.1159/000494872. Epub 2018 Nov 5. |
5. | Increased Golgi protein 73 expression in hepatocellular carcinoma tissue correlates with tumor aggression but not survival. | Sun Y, etal., J Gastroenterol Hepatol. 2011 Jul;26(7):1207-12. doi: 10.1111/j.1440-1746.2011.06733.x. |
6. | Serological AFP/Golgi protein 73 could be a new diagnostic parameter of hepatic diseases. | Tian L, etal., Int J Cancer. 2011 Oct 15;129(8):1923-31. doi: 10.1002/ijc.25838. Epub 2011 Mar 11. |
7. | Plasma proteomics of SARS-CoV-2 infection and severity reveals impact on Alzheimer and coronary disease pathways. | Wang L, etal., medRxiv. 2022 Jul 25:2022.07.25.22278025. doi: 10.1101/2022.07.25.22278025. Preprint. |
8. | GOLM1 promotes prostate cancer progression through activating PI3K-AKT-mTOR signaling. | Yan G, etal., Prostate. 2018 Feb;78(3):166-177. doi: 10.1002/pros.23461. Epub 2017 Nov 27. |
Golm1 (Rattus norvegicus - Norway rat) |
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GOLM1 (Homo sapiens - human) |
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Golm1 (Mus musculus - house mouse) |
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Golm1 (Chinchilla lanigera - long-tailed chinchilla) |
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GOLM1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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GOLM1 (Canis lupus familiaris - dog) |
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Golm1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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GOLM1 (Sus scrofa - pig) |
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GOLM1 (Chlorocebus sabaeus - green monkey) |
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Golm1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Golm1
376 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
BI286519 |
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BI286630 |
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BG381403 |
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AA891427 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 43 | 47 | 39 | 19 | 39 | 74 | 35 | 29 | 11 | |||
Low | 10 | 2 | 2 | 8 | 11 | 12 | 8 | ||||||
Below cutoff |
RefSeq Transcripts | NM_001427411 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006253546 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017587677 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039096415 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039096416 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039096417 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063276736 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005495817 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005495818 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010058934 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010058935 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | JAXUCZ010000017 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000037597 ⟹ ENSRNOP00000029929 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000115015 ⟹ ENSRNOP00000080545 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001427411 ⟹ NP_001414340 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039096415 ⟹ XP_038952343 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039096416 ⟹ XP_038952344 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039096417 ⟹ XP_038952345 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063276736 ⟹ XP_063132806 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005495817 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XR_005495818 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XR_010058934 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010058935 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001414340 | (Get FASTA) | NCBI Sequence Viewer |
XP_038952343 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038952344 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038952345 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063132806 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000029929.6 | ||
ENSRNOP00000080545 | |||
ENSRNOP00000080545.1 |
RefSeq Acc Id: | ENSRNOP00000029929 ⟸ ENSRNOT00000037597 |
RefSeq Acc Id: | XP_038952343 ⟸ XM_039096415 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038952344 ⟸ XM_039096416 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8I5ZPY1 (UniProtKB/TrEMBL), D4AEL2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038952345 ⟸ XM_039096417 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8I5ZPY1 (UniProtKB/TrEMBL), D4AEL2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000080545 ⟸ ENSRNOT00000115015 |
RefSeq Acc Id: | NP_001414340 ⟸ NM_001427411 |
- UniProtKB: | A0A8I5ZPY1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063132806 ⟸ XM_063276736 |
- Peptide Label: | isoform X2 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-D4AEL2-F1-model_v2 | AlphaFold | D4AEL2 | 1-397 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13700279 | ||||||||
Promoter ID: | EPDNEW_R10800 | ||||||||
Type: | single initiation site | ||||||||
Name: | Golm1_1 | ||||||||
Description: | golgi membrane protein 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1589384 | AgrOrtholog |
BioCyc Gene | G2FUF-10411 | BioCyc |
Ensembl Genes | ENSRNOG00000018400 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000037597.7 | UniProtKB/TrEMBL |
ENSRNOT00000115015.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.10.287.1490 | UniProtKB/TrEMBL |
InterPro | GOLM1/CASC4 | UniProtKB/TrEMBL |
KEGG Report | rno:680692 | UniProtKB/TrEMBL |
NCBI Gene | 680692 | ENTREZGENE |
PANTHER | PTHR15896 | UniProtKB/TrEMBL |
PTHR15896:SF8 | UniProtKB/TrEMBL | |
PhenoGen | Golm1 | PhenoGen |
PRINTS | GOLM1CASC4 | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000018400 | RatGTEx |
UniProt | A0A8I5ZPY1 | ENTREZGENE, UniProtKB/TrEMBL |
D4AEL2 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2012-09-26 | Golm1 | golgi membrane protein 1 | LOC680692 | similar to Golgi phosphoprotein 2 (Golgi membrane protein GP73) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2006-11-19 | LOC680692 | similar to Golgi phosphoprotein 2 (Golgi membrane protein GP73) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |