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Gene: BRPF3 (bromodomain and PHD finger containing 3) Sus scrofa

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Symbol:

BRPF3

Name:

bromodomain and PHD finger containing 3

RGD ID:

14071913

Description:

ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (inferred); histone H4K12 acetyltransferase activity (inferred); histone H4K5 acetyltransferase activity (inferred); INVOLVED IN chromatin organization (inferred); chromatin remodeling (inferred); positive regulation of DNA replication (inferred); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN histone acetyltransferase complex (inferred); MOZ/MORF histone acetyltransferase complex (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

bromodomain and PHD finger-containing protein 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	31,926,308 - 31,966,001 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	31,926,313 - 31,966,006 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	36,856,521 - 36,865,837 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin organization (IEA)

chromatin remodeling (IBA,IEA)

positive regulation of DNA replication (IEA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

histone acetyltransferase complex (IEA)

MOZ/MORF histone acetyltransferase complex (IBA,IEA)

nucleus (IBA,IEA)

Molecular Function

histone H3K14 acetyltransferase activity (IEA)

histone H4K12 acetyltransferase activity (IEA)

histone H4K5 acetyltransferase activity (IEA)

histone H4K8 acetyltransferase activity (IEA)

histone reader activity (IBA)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

BRPF3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	31,926,308 - 31,966,001 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	31,926,313 - 31,966,006 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	36,856,521 - 36,865,837 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BRPF3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	36,196,744 - 36,232,790 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	36,196,006 - 36,232,790 (+)	Ensembl			hg38	GRCh38
GRCh37	6	36,164,521 - 36,200,567 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	36,272,528 - 36,308,545 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	36,272,527 - 36,308,541	NCBI
Celera	6	37,719,088 - 37,755,105 (+)	NCBI		Celera
Cytogenetic Map	6	p21.31	NCBI
HuRef	6	35,884,145 - 35,920,113 (+)	NCBI		HuRef
CHM1_1	6	36,166,317 - 36,202,330 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	36,017,037 - 36,053,081 (+)	NCBI		T2T-CHM13v2.0

Brpf3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	29,020,088 - 29,057,763 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	29,020,064 - 29,058,923 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	28,801,126 - 28,838,789 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	28,801,090 - 28,839,949 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	28,938,071 - 28,975,734 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	28,528,715 - 28,566,378 (+)	NCBI		MGSCv36	mm8
Celera	17	29,360,452 - 29,393,360 (+)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	15.03	NCBI

Brpf3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	6,866,378 - 6,904,456 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	20	6,867,635 - 6,904,456 (+)	Ensembl				GRCr8
mRatBN7.2	20	6,864,684 - 6,902,760 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	6,865,985 - 6,902,690 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	20	7,582,306 - 7,612,192 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	6,944,161 - 6,974,050 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	7,425,707 - 7,455,600 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	20	7,221,435 - 7,251,328 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	20	8,217,400 - 8,247,293 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	20	8,220,420 - 8,250,313 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	20	7,237,712 - 7,267,605 (+)	NCBI		F344_StmMcwi
Rnor_6.0	20	6,047,800 - 6,086,099 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	6,049,286 - 6,086,099 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	20	8,301,702 - 8,339,497 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	20	7,090,877 - 7,121,564 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	20	8,424,988 - 8,454,924 (+)	NCBI		Celera
RGSC_v3.1	20	7,086,214 - 7,122,618 (+)	NCBI
Cytogenetic Map	20	p12	NCBI

Brpf3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	3,951,160 - 3,985,338 (+)	Ensembl
ChiLan1.0	NW_004955437	3,951,160 - 3,985,133 (+)	NCBI	ChiLan1.0	ChiLan1.0

BRPF3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	50,661,710 - 50,697,629 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	46,531,510 - 46,567,433 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	35,755,305 - 35,791,304 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	36,956,841 - 36,992,113 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	36,959,709 - 36,989,933 (+)	Ensembl			panPan2	panpan1.1

BRPF3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	5,315,228 - 5,346,328 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	5,310,617 - 5,350,055 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	5,331,493 - 5,366,230 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	5,659,469 - 5,694,224 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	5,662,630 - 5,694,224 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	5,314,136 - 5,348,838 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	5,393,160 - 5,427,851 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	5,493,161 - 5,527,895 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Brpf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	40,802,400 - 40,833,409 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	23,126,607 - 23,157,876 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	23,126,821 - 23,157,838 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BRPF3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	35,891,139 - 35,926,621 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	35,891,141 - 35,923,084 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	36,151,210 - 36,186,729 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Brpf3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	21,431,574 - 21,462,051 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	21,431,574 - 21,466,158 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Brpf3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	18	5,022,353 - 5,059,082 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in BRPF3
346 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021098638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT797465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU407302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01082630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000029689 ⟹ ENSSSCP00000027124

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	31,926,308 - 31,966,001 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000047983 ⟹ ENSSSCP00000053634

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	31,926,308 - 31,962,520 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000050882 ⟹ ENSSSCP00000056380

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	31,926,308 - 31,966,001 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000071981 ⟹ ENSSSCP00000071210

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	31,926,308 - 31,966,001 (+)	Ensembl

RefSeq Acc Id:

XM_021098638 ⟹ XP_020954297

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	31,926,313 - 31,966,006 (+)	NCBI

Sequence:

show sequence

GCTCCGTGGCGGCAGCGGCGGCGACGGCGGCTTCATTCCCCCTCCTCCCCCGGGAGCGGCGGCG
GCGGCTGGGCTGGGGCCCCAGCGCGGGCCGGGAGGGGGCACGTCAGTGGCCGCCGAGGCTAGCG
CGGGAGGAGGCCGCGCTTCGCTCCCCCGGCCGAACCGACTGCTCGACTGCCGGCCCGCCCGCGC
CCAGGGGCCCCCGAACGGTGGGGCCGGGCCAGCGGCTGAGGCCTGTCTCGTTGGTTCTCAGGTG
CCATGAGGAAGCTTCGCCGGAAATCGCGGCAGAATGCCGAGGGCCGGCGCTCCCCATCCCCCTA
TAGTCTGAAGTGCTCACCCACTCGGGAGACCCTGACATATGCCCAGGCCCAGCGGATTGTCGAG
GTGGACATCGATGGACGTCTGCACCGTATTAGCATCTATGACCCACTCAAGATCATCACAGAGG
ATGAGTTGACCGCCCAGGATATCACTGAATGCAACAGTAACAAGGAAAACAGTGAGCAGCCTCA
GTTCCCTGGTAAGTCCAAAAAACCCTCATCCAAGGGCAAGAAGAAGGAGTCCTGCTCCAAGTAT
GCATCTGGCACTTCTTTTCACCTCCCGCAACCCAGCTTCCGTGTGGTGGACTCAGGCAGTCAGC
CAGAGGCTCCCCCCCTGCCTGCTGCTTACTATCGCTACATCGAGAAGCCGCCTGAAGACCTGGA
TGCAGAGGTTGAGTACGACATGGATGAGGAGGACCTGGCCTGGCTGGACATGGTGAACGAGAAG
CGGCGGGTAGATGGGCACGGTTTGGTGTCAGCAGACACCTTTGAGCTGCTGGTGGACCGGCTTG
AGAAGGAGTCGTACTTGGAGAGTCGTAGCAATGGAGCCCAGCAGTCGCTCATTGACGAAGATGC
TTTCTGCTGCGTGTGCCTGGATGACGAATGCCACAACAGCAACGTCATTCTCTTCTGTGACATC
TGCAACCTGGCTGTACACCAGGAGTGCTATGGTGTCCCCTACATCCCTGAGGGTCAGTGGTTGT
GCCGCTGCTGCTTGCAGTCTCCTTCCCGGCCTGTGGATTGCGTCCTCTGTCCCAATAAGGGTGG
CGCCTTCAAACAGACCAGCGATGGGCACTGGGCCCACGTTGTGTGTGCCATCTGGATCCCTGAA
GTCTGCTTTGCTAACACCGTGTTCCTGGAGCCCATTGAGGGCATTGACAACATCCCCCCTGCCC
GCTGGAAACTAACCTGCTATATCTGCAAGCAGAAGGGGCTGGGCGCAGCCATCCAGTGCCATAA
AGTGAACTGCTACACGGCCTTCCATGTGACATGTGCACAGCGGGCTGGGCTCTTCATGAAGATT
GAGCCTATGCGTGAGACCAGCCTCAATGGCACCATCTTCACAGTGCGCAAGACCGCCTACTGTG
AGGCCCACTCGCCGCCAGGTGCTGCCACTGCTAGGAGGAAGGGTGACTCCCCTGGAAGCCTCAG
TGAGGGTGGGGAGGAGGAAGGACTGAAGGAGGGCTGTGGGGAGGAGGAAGAGAAGGAAGAGGTG
GAAGAGGAAGAGGAAGATGAAGGCCAAGGTGGGGTAGGCGGCTCCCTCAAGGGTGTGTCCAAGA
AGAACAAGATGACTTCAAAGCAAAGGATCAAGAAGGAGCCAGAGGAAGTGGGCCGAGACACACC
TTCTACTGTCCCCATGGTCACTGTCCCACAGATACCCTCTTACAGGTTGAACAAGATCTGTAGT
GGTCTCTCCTTTCAGAGGAAAAACCAGTTCATGCAGCGGCTTCACAACTACTGGCTGTTGAAGC
GGCAGGCACGGAACGGTGTCCCCCTCATCCGGCGCCTGCACTCCCACCTGCAGTCCCAAAGGAA
TGCTGAGCAGCGAGAGCAGGACGAGAAGACAAGTGCGGTGAAGGAAGAGCTGAAATACTGGCAG
AAGCTCCGGCATGACCTGGAGCGGGCACGGCTGCTAATTGAGCTGATTCGGAAACGAGAGAAGC
TCAAACGGGAGCAGGTCAAGCTCCAGCAGGCTGCCATGGAGCTAGAGCTGATGCCATTCAATGT
TCTGCTGAGGACAACACTGGACTTGCTGCAAGAGAAGGATCCCGCACACATCTTTGCTGAACCT
GTCAACCTGAGTGAGGTTCCAGATTACCTGGAATTCATATCCAAGCCAATGGATTTTTCTACCA
TGAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTGAGGAGGACTTTAACCT
TATAGTTACCAACTGCATGAAGTATAATGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCGC
CTGCGGGACCTGGGAGGGGCCATCCTGCGGCACGCCCGGCGGCAGGCAGAGAACATCGGCTATG
ACCCCGAGAGGGGCACCCACCTGCCCGAGTCACCCAAACTGGAGGACTTTTACCGCTTCTCCTG
GGAAGACGTGGACAACATCCTCGTCCCAGAGAACCGGGCCCACTTGTCCCCGGAGGTGCAGCTG
AAGGAGCTGCTGGAGAAACTGGACCTGGTGAGTGCCATGCGGTCCAGTGGGGCCCGGACCCGCC
GTGTCCGCCTGCTGCGCCGGGAGATCAATGCCCTTCGACAGAAGCTGGCACAGCCACCGCCGCC
ACCACCACCGCAGCCACCATCACTGAACAAGACTGTGTCCAACGGGGAGCTTCCAGCAGGGCCT
CAGGGGGATATGGCTGTGCTGGAGCAGGCCCCGCAGGAGGAGCCAGAAGATGATGGGGACAGAG
ATGATTCTAAACTGCCTCCCCCGCCAACTCTGGAGCCCACAGGGCCTGCACCTTCCTTGTCTGA
GCAAGAATCCCCTCCGGATCCCCCCACTCTGAAACCTATCAGTGATAGCAAACCTTCAAGCCGA
TTCCTAAAGCCCAGAAAAGTGGAAGAAGATGAGCTTTTGGAAAAATCACCTCTGCAGCTAGGGA
GCATGCCCTTGCAACGCCTGCTAAGTGACAATGGCATCAATAGGGTATCCCTCATGGCCCCCGA
CACGTCCCCTGCTGGTGCCCCACTCAGTGGCGTGGGTCGCCGCACATCAGTCCTCTTCAGGAAG
GCCAAGAATGGGGTTAAGCTTCAGAGGAGCCCAGATGGGGCCCTGGAGAACGGCGAGGACCACG
GTGCAGTGGGCTCTCCGGACTCCCCTGCCAGCATTGAGGATGAACGGCATTCCCGGAAGCGGCC
CAGGAGCAGGAGCTGTAGTGAGAGCGAAGGGGAGAGGTCCCCCCAGCAGGAGGAAGAGACAGGC
GTGACCAACGGCTTTGGAAAACACACCGAAAGCGGGTCTGACTCAGAATGTAGTTTGGGTCTCA
GTGGTGGACTGGCATTTGAAGCTTGCAGTGGTCTGACACCCCCCAAACGCAGCCGAGGGAAGCC
AGCCCTGTCTCGAGTGCCCTTCCTGGAAGGTGTGAATGGAGACTCTGACTACAATGGCTCAGGC
AGAAGTCTCCTGATGCCCTTTGAAGACCGCGGAGATCTGGAGCCCCTGGAGCTGGTGTGGGCCA
AGTGCCGAGGTTATCCCTCCTACCCCGCCTTGATCATCGACCCCAAGATGCCCCGGGAGGGCCT
CCTGCACAATGGTGTCCCCATTCCTGTTCCCCCACTGGATGTGCTGAAGCTGGGAGAGCAGAAG
CAGGCCGAGGCTGGAGAGAAGCTCTTCCTTGTCCTCTTCTTTGACAACAAGCGCACCTGGCAGT
GGCTTCCGAGGGACAAAGTCCTGCCCCTGGGTGTGGAAGACACTGTGGACAAGCTCAAGATGCT
GGAAGGCCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTATGACCGCGCGATGATCCAC
CTCAGCCGAGTGCGGGGGCCCCACTCCTTTGTCACCTCCAGCTACCTGTAAGGGCGGGGCCTGG
CCTGCATCTGTTTGCCCTGCCTCCGTTCCACGGGGCACAGGAAGCCTGTTCCTGCCCCAGCCAG
ACAAATGGCTGGCAGCTTCCCCTCCCATGGCAGGCCGGGGACCGGGCTGTGTCCTCCCCAAGAG
CAAGGCCCTAGTTTTGACCAACTGCATGGTTCCCTCGGTGGGCCTGCTGTGTGCCAAAACCTCC
CACCTGAGCTCCTCCGGGGCCATTCTGCTGATGACTAGTTAGGAGCAGAAGCAGCTGTGAGGCT
TGGGCCCAGCTGAGGGATAGACCTGGCCCAGTGGCGAGAGGTCCCGGGCTCTTTCTCACGGGTG
TGCTGGCCCCTCCACTCCACTCCCAACTAACTACACCTCAGGGCGAGCGAGGCTCTGACACGAC
CCCAGAGGTGCTGTGCATCCCTAGGGCTGCGCAGGGAACCTCTTGGAGCCTACCTTCTCTCTCC
CTCCGTCACCCATCCTCATTCCTCTTCCCTGTCCCATCTTCACCTCTGCCCAGTCTCTCTTCTT
CCCGTGTTCCTTTCCCTACTTTCTCTTGTGCCAAACTGACAGAAACCATCACCAGACTGATCTT
TTTCTTTTTATGTCTCATTCCCTTTGAGGCCAGCTGTTAGGTGGGTCCCTCAACCTGGCCCCTG
GGGGCCCGGGACAGAGACCAGCCCACCCCTTGGGTGACCCCCTCACCAGCACACCCACACCCCT
TCATATCTGCTGTAGACAACAGCTGAGGCCAAGCTGCAAGAGCTTGCCCCTTGGGTTCGAGGCA
GGGCCCCTCCTGCCCGCTTCCATCTTGCCAGGAGGCAGGCTCCTGTCAGCAGCCCAGGCTGGGG
TGTGCATGTCCATCGGTCTCCTTGGGTTCTGGGGCTTGTTGGGGTGAAGCTGGTGCCCTTTGGC
TGGGTCTGCCCTCTCACCCCTCCTACCCTCTCCTTGTGGGCTTTTCCTTTTCTGCAGCGGCAGC
CTCTTGCCTCTGCTCCACATGGATGGCACGGTGCCTGCACTCCAGCACCTTCTGTCTTGCGCCT
TGCTCCCCCCAGCCTCTGCTGCTCCGAACTCCAGGGAACGCAGCACTTTTATTTCAGACCCTCA
GTCTCCTTCCCTCTTTTCCTTCAACCCCCTCACCACCTTTACCTTCTCAGAAACAGAAGGGAAG
AAAAAAACTGTGAAATGGGGAATGCTGACTGACAAACCAACACAACTTTCAGAGGCTTCGATGT
CTGTTCTCTGGATGTTCCTTTCACCTCTTAAGCACCAAAGTCGCAGGGCCAGGTTGCAGGCCAC
TGATCGCCATGTTGATTTTTAACCTGATGTTCTTTTTAATTGTTTTAAATTTTTCGTAGGGGAG
TTTTGGACAAAACGAAGTCACTGGGGAGATCACTGCCATTTTTACATACTTGACTTTTTAAAAA
TACAACCAACCAACCGCCACGACTTCTTGTACATTTGGGACATGAGCCAGAGTTTACAAGGGAA
CCAACAAAACTCTCTATAACATAAAGGATGGGGTTTTGGATTTTGTACAATAATAAAACTACAA
TGCAGCCTATGGCTAGGGAAGGACATGATGTATATAATTGTAAAATACTGTTCTAAATTATTCA
GGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCTGAGTATTTGACATGCACACAGTG
TGGTTTATTTTAAGGAGCCAGTGCGCCCCCCTCTCCCCAGGTAGTTGGTTGGCTGTGGACTCTG
TGACTTTCGTCTCAACCTGTGTTGTAAGATCTCGGGGCTCTCGTGCTTTCTCTTTCTGTGTCTC
TTTCTTCCCCAATCTCTTCCTTCTTTTCTTAGTCTCTCTTTTTTTTTTCAATCTCTTTGACTCT
TTCAGTCTCTCTCTGAGTCTCATTTTTAAAACTGCTCTTTTAGAATGGGAAAAGGCTCAGATCC
TGCTGTGGCATGGGGCCTATGTGTCTCAGTCGCGTCTGCTGTGAAGCACACGATGCTCTATTTA
TTGTAGAAAGTGACTTTATTTGCTTTCTAGAATTGTTTATAACAGATGGTATAAGAGAGGTAAT
AAACAGAGAAGAATCTATGCTTGTAAAGAATACAAAAGTTAATTTTACCTACTATAATATGACT
GTCTGAAACTTATTTTCTCTCTGAGAAATAAATGTTCTAATGGGCAGCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020954297	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000027124.3
	ENSSSCP00000053634.2
	ENSSSCP00000056380.2
	ENSSSCP00000071210
	ENSSSCP00000071210.2
	ENSSSCP00015028285.1
	ENSSSCP00015028317.1
	ENSSSCP00015028379.1
	ENSSSCP00015028417.1
	ENSSSCP00025003623.1
	ENSSSCP00025003626.1
	ENSSSCP00025003632.1
	ENSSSCP00025003637.1
	ENSSSCP00030046957.1
	ENSSSCP00030046962.1
	ENSSSCP00030047018.1
	ENSSSCP00035005056.1
	ENSSSCP00035005059.1
	ENSSSCP00040004065.1
	ENSSSCP00040004068.1
	ENSSSCP00040004083.1
	ENSSSCP00045036812.1
	ENSSSCP00045036936.1
	ENSSSCP00045037021.1
	ENSSSCP00045037100.1
	ENSSSCP00050032812.1
	ENSSSCP00050032813.1
	ENSSSCP00050032825.1
	ENSSSCP00055016986.1
	ENSSSCP00055017007.1
	ENSSSCP00055017109.1
	ENSSSCP00060048043.1
	ENSSSCP00060048044.1
	ENSSSCP00060048048.1
	ENSSSCP00060048054.1
	ENSSSCP00065020075.1
	ENSSSCP00065020077.1
	ENSSSCP00070006531.1
	ENSSSCP00070006548.1
	ENSSSCP00070006566.1
	ENSSSCP00070006568.1
	ENSSSCP00070006570.1

RefSeq Acc Id:

XP_020954297 ⟸ XM_021098638

- UniProtKB:

A0A4X1SVY7 (UniProtKB/TrEMBL), A0A5G2RAQ0 (UniProtKB/TrEMBL), A0A480XYV1 (UniProtKB/TrEMBL), A0A480JZ83 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRKLRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITED
ELTAQDITECNSNKENSEQPQFPGKSKKPSSKGKKKESCSKYASGTSFHLPQPSFRVVDSGSQP
EAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHGLVSADTFELLVDRLE
KESYLESRSNGAQQSLIDEDAFCCVCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLC
RCCLQSPSRPVDCVLCPNKGGAFKQTSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPAR
WKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTIFTVRKTAYCE
AHSPPGAATARRKGDSPGSLSEGGEEEGLKEGCGEEEEKEEVEEEEEDEGQGGVGGSLKGVSKK
NKMTSKQRIKKEPEEVGRDTPSTVPMVTVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKR
QARNGVPLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKL
KREQVKLQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTM
RRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYD
PERGTHLPESPKLEDFYRFSWEDVDNILVPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR
VRLLRREINALRQKLAQPPPPPPPQPPSLNKTVSNGELPAGPQGDMAVLEQAPQEEPEDDGDRD
DSKLPPPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKPRKVEEDELLEKSPLQLGS
MPLQRLLSDNGINRVSLMAPDTSPAGAPLSGVGRRTSVLFRKAKNGVKLQRSPDGALENGEDHG
AVGSPDSPASIEDERHSRKRPRSRSCSESEGERSPQQEEETGVTNGFGKHTESGSDSECSLGLS
GGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLMPFEDRGDLEPLELVWAK
CRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQW
LPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAMIHLSRVRGPHSFVTSSYL

hide sequence

Ensembl Acc Id:

ENSSSCP00000027124 ⟸ ENSSSCT00000029689

Ensembl Acc Id:

ENSSSCP00000056380 ⟸ ENSSSCT00000050882

Ensembl Acc Id:

ENSSSCP00000071210 ⟸ ENSSSCT00000071981

Ensembl Acc Id:

ENSSSCP00000053634 ⟸ ENSSSCT00000047983

Protein Domains

Bromo PHD-type PWWP

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000020803	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015052904	UniProtKB/TrEMBL
	ENSSSCG00025006885	UniProtKB/TrEMBL
	ENSSSCG00030072687	UniProtKB/TrEMBL
	ENSSSCG00035011781	UniProtKB/TrEMBL
	ENSSSCG00040007970	UniProtKB/TrEMBL
	ENSSSCG00045030559	UniProtKB/TrEMBL
	ENSSSCG00050055788	UniProtKB/TrEMBL
	ENSSSCG00055010912	UniProtKB/TrEMBL
	ENSSSCG00060078264	UniProtKB/TrEMBL
	ENSSSCG00065034318	UniProtKB/TrEMBL
	ENSSSCG00070004186	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000029689.4	UniProtKB/TrEMBL
	ENSSSCT00000047983.3	UniProtKB/TrEMBL
	ENSSSCT00000050882.3	UniProtKB/TrEMBL
	ENSSSCT00000071981	ENTREZGENE
	ENSSSCT00000071981.2	UniProtKB/TrEMBL
	ENSSSCT00015070636.1	UniProtKB/TrEMBL
	ENSSSCT00015070705.1	UniProtKB/TrEMBL
	ENSSSCT00015070842.1	UniProtKB/TrEMBL
	ENSSSCT00015070940.1	UniProtKB/TrEMBL
	ENSSSCT00025009164.1	UniProtKB/TrEMBL
	ENSSSCT00025009173.1	UniProtKB/TrEMBL
	ENSSSCT00025009183.1	UniProtKB/TrEMBL
	ENSSSCT00025009197.1	UniProtKB/TrEMBL
	ENSSSCT00030101805.1	UniProtKB/TrEMBL
	ENSSSCT00030101815.1	UniProtKB/TrEMBL
	ENSSSCT00030101921.1	UniProtKB/TrEMBL
	ENSSSCT00035014810.1	UniProtKB/TrEMBL
	ENSSSCT00035014817.1	UniProtKB/TrEMBL
	ENSSSCT00040010450.1	UniProtKB/TrEMBL
	ENSSSCT00040010455.1	UniProtKB/TrEMBL
	ENSSSCT00040010486.1	UniProtKB/TrEMBL
	ENSSSCT00045052924.1	UniProtKB/TrEMBL
	ENSSSCT00045053095.1	UniProtKB/TrEMBL
	ENSSSCT00045053226.1	UniProtKB/TrEMBL
	ENSSSCT00045053346.1	UniProtKB/TrEMBL
	ENSSSCT00050076121.1	UniProtKB/TrEMBL
	ENSSSCT00050076124.1	UniProtKB/TrEMBL
	ENSSSCT00050076150.1	UniProtKB/TrEMBL
	ENSSSCT00055021438.1	UniProtKB/TrEMBL
	ENSSSCT00055021466.1	UniProtKB/TrEMBL
	ENSSSCT00055021598.1	UniProtKB/TrEMBL
	ENSSSCT00060108027.1	UniProtKB/TrEMBL
	ENSSSCT00060108028.1	UniProtKB/TrEMBL
	ENSSSCT00060108032.1	UniProtKB/TrEMBL
	ENSSSCT00060108038.1	UniProtKB/TrEMBL
	ENSSSCT00065046698.1	UniProtKB/TrEMBL
	ENSSSCT00065046702.1	UniProtKB/TrEMBL
	ENSSSCT00070007939.1	UniProtKB/TrEMBL
	ENSSSCT00070007959.1	UniProtKB/TrEMBL
	ENSSSCT00070007982.1	UniProtKB/TrEMBL
	ENSSSCT00070007984.1	UniProtKB/TrEMBL
	ENSSSCT00070007986.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.920.10	UniProtKB/TrEMBL
	2.30.30.140	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
InterPro	Bromodomain	UniProtKB/TrEMBL
	Bromodomain-like_sf	UniProtKB/TrEMBL
	Bromodomain_CS	UniProtKB/TrEMBL
	BRPF3_ePHD	UniProtKB/TrEMBL
	Enhancer_polycomb-like_N	UniProtKB/TrEMBL
	EPHD	UniProtKB/TrEMBL
	Histone_Mod_Regulator	UniProtKB/TrEMBL
	PWWP_dom	UniProtKB/TrEMBL
	Zinc_finger_PHD-type_CS	UniProtKB/TrEMBL
	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_PHD	UniProtKB/TrEMBL
	Znf_PHD-finger	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
NCBI Gene	BRPF3	ENTREZGENE
PANTHER	BROMODOMAIN AND PHD FINGER-CONTAINING PROTEIN 3	UniProtKB/TrEMBL
	PHD FINGER PROTEINS	UniProtKB/TrEMBL
Pfam	Bromodomain	UniProtKB/TrEMBL
	EPL1	UniProtKB/TrEMBL
	PHD_2	UniProtKB/TrEMBL
	PWWP	UniProtKB/TrEMBL
	zf-HC5HC2H_2	UniProtKB/TrEMBL
PRINTS	BROMODOMAIN	UniProtKB/TrEMBL
PROSITE	BROMODOMAIN_1	UniProtKB/TrEMBL
	BROMODOMAIN_2	UniProtKB/TrEMBL
	EPHD	UniProtKB/TrEMBL
	PWWP	UniProtKB/TrEMBL
	ZF_PHD_1	UniProtKB/TrEMBL
	ZF_PHD_2	UniProtKB/TrEMBL
SMART	BROMO	UniProtKB/TrEMBL
	PHD	UniProtKB/TrEMBL
	PWWP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47370	UniProtKB/TrEMBL
	SSF57903	UniProtKB/TrEMBL
	Tudor/PWWP/MBT	UniProtKB/TrEMBL
UniProt	A0A287BBB8_PIG	UniProtKB/TrEMBL
	A0A287BIM1_PIG	UniProtKB/TrEMBL
	A0A480JZ83	ENTREZGENE, UniProtKB/TrEMBL
	A0A480XYV1	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SUA1_PIG	UniProtKB/TrEMBL
	A0A4X1SVY7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SW05_PIG	UniProtKB/TrEMBL
	A0A4X1SWB5_PIG	UniProtKB/TrEMBL
	A0A5G2RAQ0	ENTREZGENE
	I3LSN1_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A5G2RAQ0	UniProtKB/TrEMBL
VGNC ID	VGNC:85886	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
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InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar