ANKRD34A (ankyrin repeat domain 34A) - Rat Genome Database

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Pathways
Gene: ANKRD34A (ankyrin repeat domain 34A) Sus scrofa
Analyze
Symbol: ANKRD34A
Name: ankyrin repeat domain 34A
RGD ID: 13955972
Description: ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat domain-containing protein 34A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl499,378,714 - 99,382,810 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1499,377,555 - 99,382,322 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24109,021,481 - 109,025,124 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IEA)

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ANKRD34A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl499,378,714 - 99,382,810 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1499,377,555 - 99,382,322 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24109,021,481 - 109,025,124 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD34A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381145,959,441 - 145,964,575 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1145,959,441 - 145,964,575 (-)Ensemblhg38GRCh38
GRCh371145,470,515 - 145,475,647 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361144,181,865 - 144,187,004 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341142,959,551 - 142,964,691NCBI
Celera1119,673,860 - 119,679,002 (+)NCBICelera
Cytogenetic Map1q21.1NCBI
HuRef1119,434,352 - 119,439,409 (+)NCBIHuRef
CHM1_11147,327,567 - 147,332,708 (-)NCBICHM1_1
T2T-CHM13v2.01145,076,256 - 145,081,392 (-)NCBIT2T-CHM13v2.0
Ankrd34a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39396,503,599 - 96,507,442 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl396,503,952 - 96,507,091 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38396,595,928 - 96,600,126 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl396,596,636 - 96,599,775 (+)Ensemblmm10GRCm38
MGSCv37396,400,559 - 96,403,701 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36396,682,062 - 96,685,180 (+)NCBIMGSCv36mm8
Celera398,004,592 - 98,006,805 (+)NCBICelera
Cytogenetic Map3F2.1NCBI
cM Map341.93NCBI
Ankrd34a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82186,818,496 - 186,823,921 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2186,817,216 - 186,824,467 (+)EnsemblGRCr8
mRatBN7.22184,129,830 - 184,135,075 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2184,129,238 - 184,135,116 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2191,803,275 - 191,806,702 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02189,596,043 - 189,599,472 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02184,435,832 - 184,439,259 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2186,419,415 - 186,422,845 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive2186,646,324 - 186,649,754 (+)NCBILyon_Normotensive
Lyon_Hypertensive2186,315,914 - 186,319,339 (+)NCBILyon_Hypertensive
F344_StmMcwi2186,402,725 - 186,406,147 (+)NCBIF344_StmMcwi
Rnor_6.02198,720,277 - 198,725,155 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,721,724 - 198,725,154 (+)Ensemblrn6Rnor6.0
Rnor_5.02218,208,084 - 218,212,089 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42191,395,509 - 191,398,939 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2176,656,866 - 176,660,296 (+)NCBICelera
RGSC_v3.12191,362,655 - 191,389,254 (+)NCBI
Cytogenetic Map2q34NCBI
Ankrd34a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955568131,259 - 134,841 (+)Ensembl
ChiLan1.0NW_004955568130,062 - 134,841 (+)NCBIChiLan1.0ChiLan1.0
ANKRD34A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21103,353,755 - 103,356,875 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11102,942,134 - 102,947,311 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01121,793,315 - 121,798,456 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11113,871,395 - 113,874,584 (-)NCBIPanPan1.1PanPan1.1panPan2
ANKRD34A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11758,749,788 - 58,771,464 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1758,750,678 - 58,752,234 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1758,217,749 - 58,239,566 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01759,746,459 - 59,768,263 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1759,746,459 - 59,750,249 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11758,619,295 - 58,641,094 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01758,680,421 - 58,702,235 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01759,406,863 - 59,428,688 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ankrd34a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505820,817,680 - 20,822,654 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936867693,800 - 696,826 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936867693,797 - 696,820 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD34A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12012,786,058 - 12,789,260 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2012,786,933 - 12,788,423 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603815,464,564 - 15,468,144 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd34a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477217,314,813 - 17,320,009 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462477217,315,076 - 17,330,487 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ankrd34a
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1360,706,295 - 60,710,244 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in ANKRD34A
68 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
7 4 23 3 4 12 11 23 3 4

Sequence


Ensembl Acc Id: ENSSSCT00000053528   ⟹   ENSSSCP00000044831
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl499,379,140 - 99,382,808 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000056067   ⟹   ENSSSCP00000037754
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl499,378,714 - 99,382,318 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000088094   ⟹   ENSSSCP00000065197
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl499,379,177 - 99,382,810 (+)Ensembl
RefSeq Acc Id: XM_021089935   ⟹   XP_020945594
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1499,377,555 - 99,382,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021089936   ⟹   XP_020945595
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1499,377,555 - 99,382,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021089937   ⟹   XP_020945596
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1499,377,555 - 99,382,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021089938   ⟹   XP_020945597
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1499,377,555 - 99,382,322 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020945594   ⟸   XM_021089935
- UniProtKB: A0A287ALF7 (UniProtKB/TrEMBL),   A0A8D1NXI4 (UniProtKB/TrEMBL),   A0A8D1IPA2 (UniProtKB/TrEMBL),   A0A8D1NZJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020945595   ⟸   XM_021089936
- UniProtKB: A0A287ALF7 (UniProtKB/TrEMBL),   A0A8D1NXI4 (UniProtKB/TrEMBL),   A0A8D1IPA2 (UniProtKB/TrEMBL),   A0A8D1NZJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020945596   ⟸   XM_021089937
- UniProtKB: A0A287ALF7 (UniProtKB/TrEMBL),   A0A8D1NXI4 (UniProtKB/TrEMBL),   A0A8D1IPA2 (UniProtKB/TrEMBL),   A0A8D1NZJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020945597   ⟸   XM_021089938
- UniProtKB: A0A287ALF7 (UniProtKB/TrEMBL),   A0A8D1NXI4 (UniProtKB/TrEMBL),   A0A8D1IPA2 (UniProtKB/TrEMBL),   A0A8D1NZJ7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000065197   ⟸   ENSSSCT00000088094
Ensembl Acc Id: ENSSSCP00000037754   ⟸   ENSSSCT00000056067
Ensembl Acc Id: ENSSSCP00000044831   ⟸   ENSSSCT00000053528


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000037823 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015037352 UniProtKB/TrEMBL
  ENSSSCG00025069270 UniProtKB/TrEMBL
  ENSSSCG00030070016 UniProtKB/TrEMBL
  ENSSSCG00035069884 UniProtKB/TrEMBL
  ENSSSCG00040050392 UniProtKB/TrEMBL
  ENSSSCG00045031442 UniProtKB/TrEMBL
  ENSSSCG00050074509 UniProtKB/TrEMBL
  ENSSSCG00055027579 UniProtKB/TrEMBL
  ENSSSCG00060023809 UniProtKB/TrEMBL
  ENSSSCG00065000745 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000053528 ENTREZGENE
  ENSSSCT00000053528.3 UniProtKB/TrEMBL
  ENSSSCT00000056067 ENTREZGENE
  ENSSSCT00000056067.3 UniProtKB/TrEMBL
  ENSSSCT00000088094 ENTREZGENE
  ENSSSCT00000088094.2 UniProtKB/TrEMBL
  ENSSSCT00015049699.1 UniProtKB/TrEMBL
  ENSSSCT00015049741.1 UniProtKB/TrEMBL
  ENSSSCT00025095174.1 UniProtKB/TrEMBL
  ENSSSCT00025095223.1 UniProtKB/TrEMBL
  ENSSSCT00025095289.1 UniProtKB/TrEMBL
  ENSSSCT00030097925.1 UniProtKB/TrEMBL
  ENSSSCT00030097950.1 UniProtKB/TrEMBL
  ENSSSCT00030097960.1 UniProtKB/TrEMBL
  ENSSSCT00035094400.1 UniProtKB/TrEMBL
  ENSSSCT00035094409.1 UniProtKB/TrEMBL
  ENSSSCT00035094412.1 UniProtKB/TrEMBL
  ENSSSCT00040067957.1 UniProtKB/TrEMBL
  ENSSSCT00040068028.1 UniProtKB/TrEMBL
  ENSSSCT00040068047.1 UniProtKB/TrEMBL
  ENSSSCT00045053554.1 UniProtKB/TrEMBL
  ENSSSCT00045053599.1 UniProtKB/TrEMBL
  ENSSSCT00045053635.1 UniProtKB/TrEMBL
  ENSSSCT00050102002.1 UniProtKB/TrEMBL
  ENSSSCT00050102004.1 UniProtKB/TrEMBL
  ENSSSCT00050102006.1 UniProtKB/TrEMBL
  ENSSSCT00055054523.1 UniProtKB/TrEMBL
  ENSSSCT00055054554.1 UniProtKB/TrEMBL
  ENSSSCT00055054565.1 UniProtKB/TrEMBL
  ENSSSCT00060032317.1 UniProtKB/TrEMBL
  ENSSSCT00060032320.1 UniProtKB/TrEMBL
  ENSSSCT00060032324.1 UniProtKB/TrEMBL
  ENSSSCT00065000877.1 UniProtKB/TrEMBL
  ENSSSCT00065000882.1 UniProtKB/TrEMBL
  ENSSSCT00065000884.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro AN34A/B/C UniProtKB/TrEMBL
  Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
NCBI Gene ANKRD34A ENTREZGENE
PANTHER ANKYRIN REPEAT DOMAIN 34A UniProtKB/TrEMBL
  PTHR24156 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A287ALF7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1IPA2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1NXI4 ENTREZGENE
  A0A8D1NZJ7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8D1NXI4 UniProtKB/TrEMBL
VGNC ID VGNC:85335 ENTREZGENE