Smox (spermine oxidase) - Rat Genome Database

Name: Smox
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Smox (spermine oxidase) Rattus norvegicus

Analyze

Symbol:

Smox

Name:

spermine oxidase

RGD ID:

1306049

Description:

Enables polyamine oxidase activity. Involved in spermine catabolic process. Predicted to be located in cytosol; nuclear membrane; and nucleoplasm. Orthologous to human SMOX (spermine oxidase); PARTICIPATES IN polyamine metabolic pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC308652

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SMOX (spermine oxidase)	RGD	RGD
Mus musculus (house mouse):	Smox (spermine oxidase)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Smox (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SMOX (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SMOX (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Smox (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SMOX (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SMOX (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Smox (spermine oxidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SMOX (spermine oxidase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Smox (spermine oxidase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	smox (spermine oxidase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	hpo-15	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	FMS1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG6034	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER)
Drosophila melanogaster (fruit fly):	CG7460	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER)
Drosophila melanogaster (fruit fly):	CG8032	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	amx-3	Alliance	DIOPT (OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG7737	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER)
Drosophila melanogaster (fruit fly):	CG5653	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	smox	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	139,184,793 - 139,220,174 (+)	NCBI		GRCr8
mRatBN7.2	3	118,731,814 - 118,767,242 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	118,731,900 - 118,765,710 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	122,644,969 - 122,659,253 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	131,240,782 - 131,254,873 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	128,901,066 - 128,915,350 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	124,068,796 - 124,103,726 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	124,068,865 - 124,102,240 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	130,561,424 - 130,596,385 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	119,240,376 - 119,254,370 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	119,125,546 - 119,159,950 (+)	NCBI
Celera	3	117,557,725 - 117,571,162 (+)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Huntington's disease-like 1 (ISO)

middle cerebral artery infarction (ISO)

pantothenate kinase-associated neurodegeneration (ISO)

Stroke (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-alpha-phellandrene (ISO)

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP,ISO)

2,2',5,5'-tetrachlorobiphenyl (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-butoxyethanol (ISO)

2-hydroxypropanoic acid (ISO)

2-palmitoylglycerol (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP)

4-hydroxyphenyl retinamide (ISO)

5-fluorouracil (ISO)

8-Br-cAMP (ISO)

acetaldehyde (ISO)

acetamide (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (ISO)

alpha-phellandrene (ISO)

alpha-Zearalanol (EXP)

amiodarone (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

atrazine (ISO)

azathioprine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

bromobenzene (EXP)

caffeine (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

choline (ISO)

cisplatin (ISO)

clomiphene (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

D-glucose (ISO)

DDT (EXP)

deoxynivalenol (ISO)

dexamethasone (ISO)

dextran sulfate (ISO)

dichloroacetic acid (ISO)

Didecyldimethylammonium (ISO)

diethylstilbestrol (ISO)

dioxygen (EXP)

disodium selenite (ISO)

disulfiram (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

estrone (ISO)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

genistein (ISO)

gentamycin (EXP)

glucose (ISO)

hexestrol (ISO)

ketamine (EXP)

L-methionine (ISO)

lead(0) (ISO)

medroxyprogesterone acetate (ISO)

menadione (ISO)

mestranol (ISO)

methamphetamine (ISO)

methylisothiazolinone (ISO)

N-nitrosodiethylamine (ISO)

nickel atom (ISO)

niclosamide (ISO)

oxaliplatin (ISO)

ozone (EXP)

paracetamol (EXP,ISO)

paraquat (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (EXP)

phenobarbital (ISO)

PhIP (EXP)

pirinixic acid (ISO)

potassium chromate (ISO)

quercetin (ISO)

rac-lactic acid (ISO)

selenium atom (ISO)

serpentine asbestos (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

spermidine (ISO)

spermine (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tamibarotene (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

thimerosal (ISO)

thioacetamide (EXP,ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

zinc atom (ISO)

zinc(0) (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

polyamine catabolic process (ISO)

spermine catabolic process (IBA,IDA,ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

intracellular membrane-bounded organelle (ISO)

nuclear membrane (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

polyamine oxidase activity (IBA,IDA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

polyamine metabolic pathway (IDA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Effect of mitoguazone on polyamine oxidase activity in rat liver.	Ferioli ME, etal., Toxicol Appl Pharmacol. 2004 Dec 1;201(2):105-11.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	A perspective of polyamine metabolism.	Wallace HM, etal., Biochem J. 2003 Nov 15;376(Pt 1):1-14.

Additional References at PubMed

PMID:12141946	PMID:12477380	PMID:12477932	PMID:14764092	PMID:18422650	PMID:37102659

Genomics

Comparative Map Data

Smox
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	139,184,793 - 139,220,174 (+)	NCBI		GRCr8
mRatBN7.2	3	118,731,814 - 118,767,242 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	118,731,900 - 118,765,710 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	122,644,969 - 122,659,253 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	131,240,782 - 131,254,873 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	128,901,066 - 128,915,350 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	124,068,796 - 124,103,726 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	124,068,865 - 124,102,240 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	130,561,424 - 130,596,385 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	119,240,376 - 119,254,370 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	119,125,546 - 119,159,950 (+)	NCBI
Celera	3	117,557,725 - 117,571,162 (+)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

SMOX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	4,148,828 - 4,187,727 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	4,120,980 - 4,187,747 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	4,129,475 - 4,168,374 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	4,077,450 - 4,116,369 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	4,077,449 - 4,116,369	NCBI
Celera	20	4,194,572 - 4,233,196 (+)	NCBI		Celera
Cytogenetic Map	20	p13	NCBI
HuRef	20	4,078,022 - 4,117,146 (+)	NCBI		HuRef
CHM1_1	20	4,129,726 - 4,168,682 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	4,183,413 - 4,222,031 (+)	NCBI		T2T-CHM13v2.0

Smox
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	131,333,624 - 131,367,103 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	131,333,416 - 131,367,842 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	131,491,858 - 131,525,183 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	131,491,496 - 131,525,922 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	131,317,598 - 131,350,919 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	131,183,384 - 131,216,613 (+)	NCBI		MGSCv36	mm8
Celera	2	132,717,911 - 132,751,183 (+)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	63.45	NCBI

Smox
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	14,937,131 - 14,989,972 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	14,937,438 - 14,971,874 (+)	NCBI	ChiLan1.0	ChiLan1.0

SMOX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	5,094,689 - 5,134,252 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	5,091,525 - 5,131,097 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	4,167,417 - 4,206,956 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	3,965,616 - 4,004,468 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	3,965,616 - 4,004,468 (+)	Ensembl	panpan1.1		panPan2

SMOX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	17,240,910 - 17,291,258 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	17,252,537 - 17,300,451 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	17,064,337 - 17,122,972 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	17,659,530 - 17,718,356 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	17,670,961 - 17,710,018 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	17,253,747 - 17,312,426 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	17,359,712 - 17,418,236 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	17,693,183 - 17,752,085 (-)	NCBI		UU_Cfam_GSD_1.0

Smox
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	166,135,194 - 166,171,941 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	14,566,277 - 14,603,338 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936485	14,566,570 - 14,603,323 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SMOX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	31,548,636 - 31,591,975 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	31,552,927 - 31,592,007 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	35,886,931 - 35,899,388 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SMOX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666071	9,499,568 - 9,538,963 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Smox
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	5,215,393 - 5,251,552 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	5,215,924 - 5,250,970 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Smox
198 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	234
Count of miRNA genes:	155
Interacting mature miRNAs:	164
Transcripts:	ENSRNOT00000028876
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	43827364	121056321	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	50437042	119183768	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	61017749	121056321	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	70348525	121056321	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	70653097	121056321	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	78196190	146592722	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	89772419	134772419	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	91797474	136797474	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	95735366	140735366	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	97084464	142084464	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	97551417	147415807	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
619618	Rf3	Renal disease susceptibility QTL 3	6.5	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate to body weight ratio (CMO:0001270)	3	107693393	152693393	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	112287552	135181505	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	112681431	157681431	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum insulin level (CMO:0000358)	3	115638168	135181505	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	3	115638168	135181505	Rat

Markers in Region

RH130305

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	118,765,505 - 118,765,660 (+)	MAPPER	mRatBN7.2
mRatBN7.2	X	98,016,195 - 98,016,350 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	105,652,911 - 105,653,065	NCBI	Rnor6.0
Rnor_6.0	3	124,102,040 - 124,102,194	NCBI	Rnor6.0
Rnor_5.0	3	130,594,699 - 130,594,853	UniSTS	Rnor5.0
Rnor_5.0	X	105,542,178 - 105,542,332	UniSTS	Rnor5.0
RGSC_v3.4	3	119,254,170 - 119,254,324	UniSTS	RGSC3.4
RGSC_v3.4	X	122,296,883 - 122,297,037	UniSTS	RGSC3.4
Celera	X	99,055,639 - 99,055,793	UniSTS
Celera	3	117,570,962 - 117,571,116	UniSTS
RH 3.4 Map	3	1021.91	UniSTS
Cytogenetic Map	3	q36	UniSTS
Cytogenetic Map	X	q34	UniSTS

BI292153

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	118,762,797 - 118,762,960 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	124,099,332 - 124,099,494	NCBI	Rnor6.0
Rnor_5.0	3	130,591,991 - 130,592,153	UniSTS	Rnor5.0
RGSC_v3.4	3	119,251,462 - 119,251,624	UniSTS	RGSC3.4
Celera	3	117,568,254 - 117,568,416	UniSTS
RH 3.4 Map	3	1013.0	UniSTS
Cytogenetic Map	3	q36	UniSTS

Smox

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	98,015,422 - 98,016,030 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	105,652,138 - 105,652,745	NCBI	Rnor6.0
Rnor_5.0	X	105,541,405 - 105,542,012	UniSTS	Rnor5.0
Celera	X	99,054,866 - 99,055,473	UniSTS
Cytogenetic Map	X	q34	UniSTS
Cytogenetic Map	3	q36	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			22	16	15	16			60		24	3
Low	3	43	35	25	4	25	8	11	14	35	17	8	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283539	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC160836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC161894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000028876 ⟹ ENSRNOP00000028876

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	118,751,623 - 118,765,706 (+)	Ensembl
Rnor_6.0 Ensembl	3	124,088,157 - 124,102,240 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000079264 ⟹ ENSRNOP00000070554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	118,731,900 - 118,765,710 (+)	Ensembl
Rnor_6.0 Ensembl	3	124,068,865 - 124,099,541 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000096195 ⟹ ENSRNOP00000077137

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	118,731,900 - 118,762,673 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000104527 ⟹ ENSRNOP00000090716

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	118,751,623 - 118,765,706 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000109582 ⟹ ENSRNOP00000086718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	118,731,900 - 118,765,420 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000117336 ⟹ ENSRNOP00000093779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	118,731,900 - 118,765,420 (+)	Ensembl

RefSeq Acc Id:

NM_001134854 ⟹ NP_001128326

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,204,601 - 139,218,684 (+)	NCBI
mRatBN7.2	3	118,751,623 - 118,765,706 (+)	NCBI
Rnor_6.0	3	124,088,157 - 124,102,240 (+)	NCBI
Rnor_5.0	3	130,561,424 - 130,596,385 (+)	NCBI
RGSC_v3.4	3	119,240,376 - 119,254,370 (+)	RGD
Celera	3	117,557,725 - 117,571,162 (+)	RGD

Sequence:

show sequence

GTCATCTCTTCTCAGGTCACCTCTTGTCCTACTTTAGACTGGTGGCCAGGGAACTGGCACAGCT
TAAAGAGATTTGAGAGTGGGATTGATGGATTTCACCTCTTGACTTGTTGGTAGATCCTAAAACA
CGTTTCCTCCTTGGCTGTCATATCTCTCTGCCCTTTGCTGTCTCCCTTTCTGCATTTTTGGAGG
GTCTCTCTTCTTGATCAGGTCTTTAGGGAGTGAGGGCAGCTTGCAGTGAGAGCCGACCCCTACC
CCTCCCCTCTCTTGTCACAGGCTCCTAGAAAGTGAGTACGGACGGTATGCAAAGTTGTGAATCC
AGTGGCGACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGG
TGGTGATCGGCGCCGGCTTGGCTGGCCTGGCTGCAGCTCGAGCACTTCTGGAGCAGGGCTTCAC
GGATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGCGTGAAACTTGGA
CACGCCACCTTTGAGCTGGGAGCCACCTGGATCCATGGATCCCACGGGAACCCTATCTATCAAC
TAGCAGAAGCCAATGGCCTTTTGGAAGAGACAACAGATGGGGAGCGCAGCGTGGGCCGCATCAG
CCTCTACTCCAAGAATGGCGTGGCCTGCTACCTTACCAACCGTGGCCGCCGCATCCCCAAGGAC
GTGGTTGAGGAATTCAGTGATTTATACAACGAGGTCTATAACTTGACCCAGGAGTTCTTCCGGA
ATGGTAAACCAGTCAATGCTGAGAGTCAGAACAGTGTCGGGGTGTTCACCCGGGAGAAGGTGCG
GAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATC
CAGCAGTACCTGAAGGTGGAGAGCTGTGAAAGCAGCTCTCACAGCATAGATGAAGTGTCCCTGA
GCGCCTTTGGAGAATGGACGGAGATCCCTGGCGCCCATCACATCATCCCCTCCGGCTTCATGCG
AGTTGTGGAGCTGCTGGCTAAGGGCATTCCCCCACATGTCATCCAGCTGGGGAAACCCGTCCGT
TGCATCCACTGGGACCAGGCCTCGGCTCGCCCCCGGGGTCCTGAGATCGAGCCCCGTGGTGAGG
GTGACCACAATCACGACGCTGGGGAGGGTGGCCAGAGTGGAGAGAATCCCCAGCAGGGGAGGTG
GGACGAGGATGAGCAGTGGCCTGTAGTCGTGGAGTGCGAGGATTGTGAGGTGATCCCAGCAGAC
CACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCAT
GTCTGCCCACAGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGGTACCACTGACAAGATCTT
CCTTGAATTCGAGGAGCCCTTTTGGGGCCCTGAGTGCAACAGCCTGCAGTTTGTGTGGGAGGAT
GAGGCAGAGAGCTGTACCCTCACCTACCCGCCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCG
ATGTCCTTTACCCACCAGAGCGCTATGGCCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAGGC
TCTCGTCATGGAGAGGTGCGATGACGAGGCTGTAGCGGAGATCTGCACGGAGATGCTTCGACAG
TTCACAGGGAACCCCAATATACCAAAACCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAACC
CATACTTCCGGGGTTCCTATTCATACACACAGGTGGGCTCAAGTGGGGCAGATGTGGAGAAGCT
GGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGCAGGTGCTGTTCTCCGGT
GAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGTGAGG
CCGCTCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAACGGTGTCCTCACT
GCCAAACGTGTTCCTTAAAGAACCACTAACTCGTGACTGCTGGTCCCCGTCCCTTGCCCCCGTG
CTCTTAACTTCCTCATTGTCTGTAGAATGGGATTCGCCTTCTGTAGTGGACACCGGGCTGACTT
CCGACCTGGCTCTATAGCTTTTCTTTTTCTCCAGGCTGGGTAACGACCAGGTGGGATCCTGCTT
CCTGCTTTCCTCCTCTCTCCATGTTCTTGCAAGTGCCTTCAATACTTCGCATTTTTGGGATAAT
AAAAGAAGTGACCCTTAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006235063 ⟹ XP_006235125

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,218,689 (+)	NCBI
mRatBN7.2	3	118,731,814 - 118,765,733 (+)	NCBI
Rnor_6.0	3	124,068,796 - 124,102,267 (+)	NCBI
Rnor_5.0	3	130,561,424 - 130,596,385 (+)	NCBI

Sequence:

show sequence

GGCTGGCTCGGCCCTACGGTCCCGGCGGCGGCTGCAGGAGGAAGCCCGGTGGCTGCGGAGGAGG
GGAGGCGGAGAGGCCGAGGCCGCTCGCGAAGACGCTCCCCGGCTCCGCAGGGAAAGGCTCCTAG
AAAGTGAGTACGGACGGTATGCAAAGTTGTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCA
GTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGGTGGTGATCGGCGCCGGCTTGGCTGGCCT
GGCTGCAGCTCGAGCACTTCTGGAGCAGGGCTTCACGGATGTCACTGTGCTTGAGGCTTCCAGC
CACATTGGGGGCCGTGTGCAGAGCGTGAAACTTGGACACGCCACCTTTGAGCTGGGAGCCACCT
GGATCCATGGATCCCACGGGAACCCTATCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAGA
GACAACAGATGGGGAGCGCAGCGTGGGCCGCATCAGCCTCTACTCCAAGAATGGCGTGGCCTGC
TACCTTACCAACCGTGGCCGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGTGATTTATACA
ACGAGGTCTATAACTTGACCCAGGAGTTCTTCCGGAATGGTAAACCAGTCAATGCTGAGAGTCA
GAACAGTGTCGGGGTGTTCACCCGGGAGAAGGTGCGGAATCGCATCAGGGATGACCCTGACGAC
ACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGAGAGCTGTG
AAAGCAGCTCTCACAGCATAGATGAAGTGTCCCTGAGCGCCTTTGGAGAATGGACGGAGATCCC
TGGCGCCCATCACATCATCCCCTCCGGCTTCATGCGAGTTGTGGAGCTGCTGGCTAAGGGCATT
CCCCCACATGTCATCCAGCTGGGGAAACCCGTCCGTTGCATCCACTGGGACCAGGCCTCGGCTC
GCCCCCGGGGTCCTGAGATCGAGCCCCGTGGTGAGGGTGACCACAATCACGACGCTGGGGAGGG
TGGCCAGAGTGGAGAGAATCCCCAGCAGGGGAGGTGGGACGAGGATGAGCAGTGGCCTGTAGTC
GTGGAGTGCGAGGATTGTGAGGTGATCCCAGCAGACCACGTGATTGTGACCGTTTCGCTGGGCG
TGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGTCTGCCCACAGAGAAGGTGGCCGCCAT
CCACCGCCTGGGCATTGGTACCACTGACAAGATCTTCCTTGAATTCGAGGAGCCCTTTTGGGGC
CCTGAGTGCAACAGCCTGCAGTTTGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTCACCTACC
CGCCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGATGTCCTTTACCCACCAGAGCGCTATGG
CCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAGGCTCTCGTCATGGAGAGGTGCGATGACGAG
GCTGTAGCGGAGATCTGCACGGAGATGCTTCGACAGTTCACAGGGAACCCCAATATACCAAAAC
CTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGGTTCCTATTCATACAC
ACAGGTGGGCTCAAGTGGGGCAGATGTGGAGAAGCTGGCCAAGCCCCTGCCCTACACAGAGAGC
TCCAAGACAGCGCATGGAAGCTCCACAAAGCAGCAGCCTGGTCACCTTTTATCATCCAAGTGCC
CAGAACAATCCCTGGACCCTAGTAGGGGCTCCATAAAGCCCATGCAGGTGCTGTTCTCCGGTGA
GGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGTGAGGCC
GCTCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAACGGTGTCCTCACTGC
CAAACGTGTTCCTTAAAGAACCACTAACTCGTGACTGCTGGTCCCCGTCCCTTGCCCCCGTGCT
CTTAACTTCCTCATTGTCTGTAGAATGGGATTCGCCTTCTGTAGTGGACACCGGGCTGACTTCC
GACCTGGCTCTATAGCTTTTCTTTTTCTCCAGGCTGGGTAACGACCAGGTGGGATCCTGCTTCC
TGCTTTCCTCCTCTCTCCATGTTCTTGCAAGTGCCTTCAATACTTCGCATTTTTGGGATAATAA
AAGAAGTGACCCTTCCCAAGCTCCTTCGCTTCTCTCCTCCA

hide sequence

RefSeq Acc Id:

XM_006235064 ⟹ XP_006235126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,218,689 (+)	NCBI
mRatBN7.2	3	118,731,814 - 118,765,733 (+)	NCBI
Rnor_6.0	3	124,068,796 - 124,102,267 (+)	NCBI
Rnor_5.0	3	130,561,424 - 130,596,385 (+)	NCBI

Sequence:

show sequence

GGCTGGCTCGGCCCTACGGTCCCGGCGGCGGCTGCAGGAGGAAGCCCGGTGGCTGCGGAGGAGG
GGAGGCGGAGAGGCCGAGGCCGCTCGCGAAGACGCTCCCCGGCTCCGCAGGGAAAGGCTCCTAG
AAAGTGAGTACGGACGGTATGCAAAGTTGTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCA
GTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGGTGGTGATCGGCGCCGGCTTGGCTGGCCT
GGCTGCAGCTCGAGCACTTCTGGAGCAGGGCTTCACGGATGTCACTGTGCTTGAGGCTTCCAGC
CACATTGGGGGCCGTGTGCAGAGCGTGAAACTTGGACACGCCACCTTTGAGCTGGGAGCCACCT
GGATCCATGGATCCCACGGGAACCCTATCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAGA
GACAACAGATGGGGAGCGCAGCGTGGGCCGCATCAGCCTCTACTCCAAGAATGGCGTGGCCTGC
TACCTTACCAACCGTGGCCGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGTGATTTATACA
ACGAGGTCTATAACTTGACCCAGGAGTTCTTCCGGAATGGTAAACCAGTCAATGCTGAGAGTCA
GAACAGTGTCGGGGTGTTCACCCGGGAGAAGGTGCGGAATCGCATCAGGGATGACCCTGACGAC
ACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGAGAGCTGTG
AAAGCAGCTCTCACAGCATAGATGAAGTGTCCCTGAGCGCCTTTGGAGAATGGACGGAGATCCC
TGGCGCCCATCACATCATCCCCTCCGGCTTCATGCGAGTTGTGGAGCTGCTGGCTAAGGGCATT
CCCCCACATGTCATCCAGCTGGGGAAACCCGTCCGTTGCATCCACTGGGACCAGGCCTCGGCTC
GCCCCCGGGGTCCTGAGATCGAGCCCCGTGGTGAGGGTGACCACAATCACGACGCTGGGGAGGG
TGGCCAGAGTGGAGAGAATCCCCAGCAGGGGAGGTGGGACGAGGATGAGCAGTGGCCTGTAGTC
GTGGAGTGCGAGGATTGTGAGGTGATCCCAGCAGACCACGTGATTGTGACCGTTTCGCTGGGCG
TGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGTCTGCCCACAGAGAAGGTGGCCGCCAT
CCACCGCCTGGGCATTGGTACCACTGACAAGATCTTCCTTGAATTCGAGGAGCCCTTTTGGGGC
CCTGAGTGCAACAGCCTGCAGTTTGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTCACCTACC
CGCCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGATGTCCTTTACCCACCAGAGCGCTATGG
CCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAGGCTCTCGTCATGGAGAGGTGCGATGACGAG
GCTGTAGCGGAGATCTGCACGGAGATGCTTCGACAGTTCACAGGGAACCCCAATATACCAAAAC
CTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGGTTCCTATTCATACAC
ACAGGTGGGCTCAAGTGGGGCAGATGTGGAGAAGCTGGCCAAGCCCCTGCCCTACACAGAGAGC
TCCAAGACAGCGCCCATGCAGGTGCTGTTCTCCGGTGAGGCCACACACCGCAAGTACTACTCCA
CCACCCACGGTGCTCTGCTCTCTGGCCAGCGTGAGGCCGCTCGGCTCATCGAGATGTACCGAGA
CCTCTTCCAGCAGGGGCCCTGAACGGTGTCCTCACTGCCAAACGTGTTCCTTAAAGAACCACTA
ACTCGTGACTGCTGGTCCCCGTCCCTTGCCCCCGTGCTCTTAACTTCCTCATTGTCTGTAGAAT
GGGATTCGCCTTCTGTAGTGGACACCGGGCTGACTTCCGACCTGGCTCTATAGCTTTTCTTTTT
CTCCAGGCTGGGTAACGACCAGGTGGGATCCTGCTTCCTGCTTTCCTCCTCTCTCCATGTTCTT
GCAAGTGCCTTCAATACTTCGCATTTTTGGGATAATAAAAGAAGTGACCCTTCCCAAGCTCCTT
CGCTTCTCTCCTCCA

hide sequence

RefSeq Acc Id:

XM_006235065 ⟹ XP_006235127

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,220,174 (+)	NCBI
mRatBN7.2	3	118,731,814 - 118,767,242 (+)	NCBI
Rnor_6.0	3	124,068,796 - 124,103,726 (+)	NCBI
Rnor_5.0	3	130,561,424 - 130,596,385 (+)	NCBI

Sequence:

show sequence

GGCTGGCTCGGCCCTACGGTCCCGGCGGCGGCTGCAGGAGGAAGCCCGGTGGCTGCGGAGGAGG
GGAGGCGGAGAGGCCGAGGCCGCTCGCGAAGACGCTCCCCGGCTCCGCAGGGAAAGGCTCCTAG
AAAGTGAGTACGGACGGTATGCAAAGTTGTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCA
GTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGGTGGTGATCGGCGCCGGCTTGGCTGGCCT
GGCTGCAGCTCGAGCACTTCTGGAGCAGGGCTTCACGGATGTCACTGTGCTTGAGGCTTCCAGC
CACATTGGGGGCCGTGTGCAGAGCGTGAAACTTGGACACGCCACCTTTGAGCTGGGAGCCACCT
GGATCCATGGATCCCACGGGAACCCTATCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAGA
GACAACAGATGGGGAGCGCAGCGTGGGCCGCATCAGCCTCTACTCCAAGAATGGCGTGGCCTGC
TACCTTACCAACCGTGGCCGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGTGATTTATACA
ACGAGGTCTATAACTTGACCCAGGAGTTCTTCCGGAATGGTAAACCAGTCAATGCTGAGAGTCA
GAACAGTGTCGGGGTGTTCACCCGGGAGAAGGTGCGGAATCGCATCAGGGATGACCCTGACGAC
ACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGAGAGCTGTG
AAAGCAGCTCTCACAGCATAGATGAAGTGTCCCTGAGCGCCTTTGGAGAATGGACGGAGATCCC
TGGCGCCCATCACATCATCCCCTCCGGCTTCATGCGAGTTGTGGAGCTGCTGGCTAAGGGCATT
CCCCCACATGTCATCCAGCTGGGGAAACCCGTCCGTTGCATCCACTGGGACCAGGCCTCGGCTC
GCCCCCGGGGTCCTGAGATCGAGCCCCGTGGTGAGGGTGACCACAATCACGACGCTGGGGAGGG
TGGCCAGAGTGGAGAGAATCCCCAGCAGGGGAGGTGGGACGAGGATGAGCAGTGGCCTGTAGTC
GTGGAGTGCGAGGATTGTGAGGTGATCCCAGCAGACCACGTGATTGTGACCGTTTCGCTGGGCG
TGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGTCTGCCCACAGAGAAGGTGGCCGCCAT
CCACCGCCTGGGCATTGGTACCACTGACAAGATCTTCCTTGAATTCGAGGAGCCCTTTTGGGGC
CCTGAGTGCAACAGCCTGCAGTTTGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTCACCTACC
CGCCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGATGTCCTTTACCCACCAGAGCGCTATGG
CCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAGGCTCTCGTCATGGAGAGGTGCGATGACGAG
GCTGTAGCGGAGATCTGCACGGAGATGCTTCGACAGTTCACAGGGAACCCCAATATACCAAAAC
CTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGGTTCCTATTCATACAC
ACAGGTGGGCTCAAGTGGGGCAGATGTGGAGAAGCTGGCCAAGCCCCTGCCCTACACAGAGAGC
TCCAAGACAGCGGTCGGCAGTGAAGTCTGCCCGATGCCGTAATCCAGGCCATCTATTGTGTTGT
CCTTGAGAAGATGAGGCCGGTACACCAAACTAATCAGAAGCCATTGTTCCAGATGTGGGGAGCA
TAGGCACAGCTGTACCTGAAGTCTATGTGGCAGATCCTGTCAATGCTGGCCACTCACCCGCCAC
ATTGAGGAACCACACTCCCGATTCCTACCCAAGAGAGAGAAGTTCAGATGCCCACTGAAATGAT
GAATTCATGATTGCTAGAAACTGGAAATAGCCTAGGTGTGCCCCAACAGGAGAAAGGATAAACT
AATGCATACGTGCGAATATATAGAGTTCTTCACAGTAGTAAAATAAAATAAATGGCTGTTTGCA
ACA

hide sequence

RefSeq Acc Id:

XM_039104803 ⟹ XP_038960731

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,206,217 - 139,218,689 (+)	NCBI
mRatBN7.2	3	118,753,254 - 118,765,733 (+)	NCBI

RefSeq Acc Id:

XM_039104804 ⟹ XP_038960732

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,204,972 - 139,218,689 (+)	NCBI
mRatBN7.2	3	118,751,995 - 118,765,733 (+)	NCBI

RefSeq Acc Id:

XM_039104806 ⟹ XP_038960734

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,218,689 (+)	NCBI
mRatBN7.2	3	118,731,818 - 118,765,733 (+)	NCBI

RefSeq Acc Id:

XM_039104807 ⟹ XP_038960735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,218,398 (+)	NCBI
mRatBN7.2	3	118,731,814 - 118,765,429 (+)	NCBI

RefSeq Acc Id:

XM_039104808 ⟹ XP_038960736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,218,689 (+)	NCBI
mRatBN7.2	3	118,731,814 - 118,765,733 (+)	NCBI

RefSeq Acc Id:

XM_039104809 ⟹ XP_038960737

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,184,793 - 139,220,174 (+)	NCBI
mRatBN7.2	3	118,731,814 - 118,767,242 (+)	NCBI

RefSeq Acc Id:

XM_063283536 ⟹ XP_063139606

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,202,667 - 139,218,689 (+)	NCBI

RefSeq Acc Id:

XM_063283537 ⟹ XP_063139607

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,202,667 - 139,218,689 (+)	NCBI

RefSeq Acc Id:

XM_063283538 ⟹ XP_063139608

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,206,215 - 139,218,689 (+)	NCBI

RefSeq Acc Id:

XM_063283539 ⟹ XP_063139609

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,202,667 - 139,218,689 (+)	NCBI

RefSeq Acc Id:

XM_063283540 ⟹ XP_063139610

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	139,204,972 - 139,218,689 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128326	(Get FASTA)	NCBI Sequence Viewer
	XP_006235125	(Get FASTA)	NCBI Sequence Viewer
	XP_006235126	(Get FASTA)	NCBI Sequence Viewer
	XP_006235127	(Get FASTA)	NCBI Sequence Viewer
	XP_038960731	(Get FASTA)	NCBI Sequence Viewer
	XP_038960732	(Get FASTA)	NCBI Sequence Viewer
	XP_038960734	(Get FASTA)	NCBI Sequence Viewer
	XP_038960735	(Get FASTA)	NCBI Sequence Viewer
	XP_038960736	(Get FASTA)	NCBI Sequence Viewer
	XP_038960737	(Get FASTA)	NCBI Sequence Viewer
	XP_063139606	(Get FASTA)	NCBI Sequence Viewer
	XP_063139607	(Get FASTA)	NCBI Sequence Viewer
	XP_063139608	(Get FASTA)	NCBI Sequence Viewer
	XP_063139609	(Get FASTA)	NCBI Sequence Viewer
	XP_063139610	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI60836	(Get FASTA)	NCBI Sequence Viewer
	AAI61894	(Get FASTA)	NCBI Sequence Viewer
	EDL80241	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000028876
	ENSRNOP00000028876.2
	ENSRNOP00000070554
	ENSRNOP00000070554.2
	ENSRNOP00000077137.1
	ENSRNOP00000082749.1
	ENSRNOP00000086718.1
	ENSRNOP00000090716.1
	ENSRNOP00000093779.1

RefSeq Acc Id:

NP_001128326 ⟸ NM_001134854

- UniProtKB:

B1WBU6 (UniProtKB/TrEMBL), A6HQE1 (UniProtKB/TrEMBL), A0A8I5ZYI4 (UniProtKB/TrEMBL), F7F9S8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQSCESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRV
QSVKLGHATFELGATWIHGSHGNPIYQLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNRG
RRIPKDVVEEFSDLYNEVYNLTQEFFRNGKPVNAESQNSVGVFTREKVRNRIRDDPDDTEATKR
LKLAMIQQYLKVESCESSSHSIDEVSLSAFGEWTEIPGAHHIIPSGFMRVVELLAKGIPPHVIQ
LGKPVRCIHWDQASARPRGPEIEPRGEGDHNHDAGEGGQSGENPQQGRWDEDEQWPVVVECEDC
EVIPADHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSL
QFVWEDEAESCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEIC
TEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAPM
QVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP

hide sequence

RefSeq Acc Id:	XP_006235125 ⟸ XM_006235063
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JY83 (UniProtKB/TrEMBL), A0A8I5ZYI4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSCESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRV QSVKLGHATFELGATWIHGSHGNPIYQLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNRG RRIPKDVVEEFSDLYNEVYNLTQEFFRNGKPVNAESQNSVGVFTREKVRNRIRDDPDDTEATKR LKLAMIQQYLKVESCESSSHSIDEVSLSAFGEWTEIPGAHHIIPSGFMRVVELLAKGIPPHVIQ LGKPVRCIHWDQASARPRGPEIEPRGEGDHNHDAGEGGQSGENPQQGRWDEDEQWPVVVECEDC EVIPADHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSL QFVWEDEAESCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEIC TEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAHG SSTKQQPGHLLSSKCPEQSLDPSRGSIKPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEM YRDLFQQGP hide sequence

RefSeq Acc Id:	XP_006235127 ⟸ XM_006235065
- Peptide Label:	isoform X5
- UniProtKB:	B1H229 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSCESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRV QSVKLGHATFELGATWIHGSHGNPIYQLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNRG RRIPKDVVEEFSDLYNEVYNLTQEFFRNGKPVNAESQNSVGVFTREKVRNRIRDDPDDTEATKR LKLAMIQQYLKVESCESSSHSIDEVSLSAFGEWTEIPGAHHIIPSGFMRVVELLAKGIPPHVIQ LGKPVRCIHWDQASARPRGPEIEPRGEGDHNHDAGEGGQSGENPQQGRWDEDEQWPVVVECEDC EVIPADHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSL QFVWEDEAESCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEIC TEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAVG SEVCPMP hide sequence

RefSeq Acc Id:	XP_006235126 ⟸ XM_006235064
- Peptide Label:	isoform X2
- UniProtKB:	B1WBU6 (UniProtKB/TrEMBL), A6HQE1 (UniProtKB/TrEMBL), A0A8I5ZYI4 (UniProtKB/TrEMBL), F7F9S8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSCESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRV QSVKLGHATFELGATWIHGSHGNPIYQLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNRG RRIPKDVVEEFSDLYNEVYNLTQEFFRNGKPVNAESQNSVGVFTREKVRNRIRDDPDDTEATKR LKLAMIQQYLKVESCESSSHSIDEVSLSAFGEWTEIPGAHHIIPSGFMRVVELLAKGIPPHVIQ LGKPVRCIHWDQASARPRGPEIEPRGEGDHNHDAGEGGQSGENPQQGRWDEDEQWPVVVECEDC EVIPADHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSL QFVWEDEAESCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEIC TEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAPM QVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP hide sequence

RefSeq Acc Id:

ENSRNOP00000070554 ⟸ ENSRNOT00000079264

RefSeq Acc Id:

ENSRNOP00000028876 ⟸ ENSRNOT00000028876

RefSeq Acc Id:	XP_038960737 ⟸ XM_039104809
- Peptide Label:	isoform X8
- UniProtKB:	B1H229 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960736 ⟸ XM_039104808
- Peptide Label:	isoform X7
- UniProtKB:	B1H229 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960735 ⟸ XM_039104807
- Peptide Label:	isoform X6
- UniProtKB:	B1H229 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960734 ⟸ XM_039104806
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038960732 ⟸ XM_039104804
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038960731 ⟸ XM_039104803
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZYI4 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000086718 ⟸ ENSRNOT00000109582

RefSeq Acc Id:

ENSRNOP00000093779 ⟸ ENSRNOT00000117336

RefSeq Acc Id:

ENSRNOP00000090716 ⟸ ENSRNOT00000104527

RefSeq Acc Id:

ENSRNOP00000077137 ⟸ ENSRNOT00000096195

RefSeq Acc Id:	XP_063139606 ⟸ XM_063283536
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZYI4 (UniProtKB/TrEMBL), A0A0G2JY83 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139607 ⟸ XM_063283537
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZYI4 (UniProtKB/TrEMBL), A6HQE1 (UniProtKB/TrEMBL), B1WBU6 (UniProtKB/TrEMBL), F7F9S8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139609 ⟸ XM_063283539
- Peptide Label:	isoform X7
- UniProtKB:	B1H229 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139610 ⟸ XM_063283540
- Peptide Label:	isoform X9
- UniProtKB:	A6HQE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139608 ⟸ XM_063283538
- Peptide Label:	isoform X4

Protein Domains

Amine oxidase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B1WBU6-F1-model_v2	AlphaFold	B1WBU6	1-555	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692452

Promoter ID:

EPDNEW_R2975

Type:

initiation region

Name:

Smox_1

Description:

spermine oxidase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	124,068,807 - 124,068,867	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306049	AgrOrtholog
BioCyc Gene	G2FUF-47801	BioCyc
BioCyc Pathway	PWY-6117 [spermine and spermidine degradation I]	BioCyc
BioCyc Pathway Image	PWY-6117	BioCyc
Ensembl Genes	ENSRNOG00000021255	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSRNOG00000059641	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000028876	ENTREZGENE
	ENSRNOT00000028876.4	UniProtKB/TrEMBL
	ENSRNOT00000079264.2	UniProtKB/TrEMBL
	ENSRNOT00000091530.2	UniProtKB/TrEMBL
	ENSRNOT00000096195.1	UniProtKB/TrEMBL
	ENSRNOT00000104527.1	UniProtKB/TrEMBL
	ENSRNOT00000109582.1	UniProtKB/TrEMBL
	ENSRNOT00000117336.1	UniProtKB/TrEMBL
Gene3D-CATH	3.50.50.60	UniProtKB/TrEMBL
	3.90.660.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7193521	IMAGE-MGC_LOAD
	IMAGE:7456805	IMAGE-MGC_LOAD
InterPro	Amino_oxidase	UniProtKB/TrEMBL
	FAD/NAD-bd_sf	UniProtKB/TrEMBL
KEGG Report	rno:308652	UniProtKB/TrEMBL
MGC_CLONE	MGC:187476	IMAGE-MGC_LOAD
	MGC:187552	IMAGE-MGC_LOAD
NCBI Gene	308652	ENTREZGENE
PANTHER	FLAVIN MONOAMINE OXIDASE	UniProtKB/TrEMBL
	SPERMINE OXIDASE	UniProtKB/TrEMBL
Pfam	Amino_oxidase	UniProtKB/TrEMBL
PhenoGen	Smox	PhenoGen
PRINTS	ADXRDTASE	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000021255	RatGTEx
	ENSRNOG00000059641	RatGTEx
Superfamily-SCOP	FAD-linked reductases, C-terminal domain	UniProtKB/TrEMBL
	SSF51905	UniProtKB/TrEMBL
UniProt	A0A0G2JY83	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y9C4_RAT	UniProtKB/TrEMBL
	A0A8I5ZYI4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A6T7_RAT	UniProtKB/TrEMBL
	A0A8I6AE29_RAT	UniProtKB/TrEMBL
	A0A8I6AJG4_RAT	UniProtKB/TrEMBL
	A6HQE1	ENTREZGENE, UniProtKB/TrEMBL
	A6HQE3	ENTREZGENE, UniProtKB/TrEMBL
	B1H229	ENTREZGENE, UniProtKB/TrEMBL
	B1WBU6	ENTREZGENE
	F7F9S8	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	B1WBU6	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Smox	spermine oxidase	Smox_predicted	spermine oxidase (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Smox_predicted	spermine oxidase (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

RGD Manual Annotations

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