Advanced Search (OLGA)

Gene: RING1 (ring finger protein 1) Canis lupus familiaris

Analyze

Symbol:

RING1

Name:

ring finger protein 1

RGD ID:

12236321

Description:

ENCODES a protein that exhibits chromatin binding (inferred); metal ion binding (inferred); transferase activity (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); camera-type eye morphogenesis (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN PcG protein complex (ortholog); PRC1 complex (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

E3 ubiquitin-protein ligase RING1; polycomb complex protein RING1; RING-type E3 ubiquitin transferase RING1; RING1a

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RING1 (ring finger protein 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ring1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ring1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ring1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RING1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ring1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RING1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RING1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ring1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ring1 (ring finger protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	2,671,578 - 2,675,488 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	2,671,578 - 2,675,488 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	2,752,719 - 2,756,629 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	3,002,311 - 3,006,226 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	3,002,311 - 3,006,226 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	2,670,496 - 2,674,406 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	2,751,860 - 2,755,773 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	2,826,435 - 2,830,348 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anterior/posterior pattern specification (ISO)

camera-type eye morphogenesis (ISO)

chromatin organization (IEA,ISO)

chromatin remodeling (IEA)

DNA-templated transcription (IEA)

gene expression (ISO)

negative regulation of DNA-templated transcription (IBA,IEA,ISO)

protein ubiquitination (IEA)

Cellular Component

nuclear body (IEA)

nuclear speck (IEA)

nucleoplasm (IEA)

nucleus (IEA)

PcG protein complex (IBA,IEA,ISS)

PRC1 complex (IEA,ISS)

sex chromatin (IEA)

ubiquitin ligase complex (IBA,IEA)

Molecular Function

chromatin binding (IBA,IEA)

metal ion binding (IEA)

protein binding (ISO)

transferase activity (IEA)

ubiquitin protein ligase activity (IBA,IEA)

ubiquitin-protein transferase activator activity (IEA)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

histone modification pathway (ISO)

References

Additional References at PubMed

PMID:15607421	PMID:30032202

Genomics

Comparative Map Data

RING1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	2,671,578 - 2,675,488 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	2,671,578 - 2,675,488 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	2,752,719 - 2,756,629 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	3,002,311 - 3,006,226 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	3,002,311 - 3,006,226 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	2,670,496 - 2,674,406 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	2,751,860 - 2,755,773 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	2,826,435 - 2,830,348 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

RING1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	33,208,500 - 33,212,716 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	33,208,491 - 33,212,722 (+)	Ensembl			hg38	GRCh38
GRCh37	6	33,176,277 - 33,180,493 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	33,284,264 - 33,288,477 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	33,284,263 - 33,288,476	NCBI
Celera	6	34,730,650 - 34,734,863 (+)	NCBI		Celera
Cytogenetic Map	6	p21.32	NCBI
HuRef	6	32,918,331 - 32,922,544 (+)	NCBI		HuRef
CHM1_1	6	33,178,164 - 33,182,377 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	33,029,853 - 33,034,069 (+)	NCBI		T2T-CHM13v2.0

Ring1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	34,239,766 - 34,243,654 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	34,239,766 - 34,243,654 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	34,020,792 - 34,024,680 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	34,020,792 - 34,024,680 (-)	Ensembl			mm10	GRCm38
MGSCv37	17	34,157,737 - 34,161,625 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	33,631,538 - 33,635,097 (-)	NCBI		MGSCv36	mm8
Celera	17	36,766,927 - 36,770,809 (-)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	17.98	NCBI

Ring1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	4,832,013 - 4,835,516 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	20	4,831,993 - 4,835,513 (+)	Ensembl				GRCr8
mRatBN7.2	20	4,830,120 - 4,833,623 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	4,830,053 - 4,833,620 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	20	5,581,912 - 5,585,405 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	4,943,666 - 4,947,159 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	5,424,543 - 5,428,055 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	20	5,223,471 - 5,226,985 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	20	6,208,675 - 6,212,186 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	20	6,211,613 - 6,215,124 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	20	5,238,704 - 5,242,214 (+)	NCBI		F344_StmMcwi
Rnor_6.0	20	3,812,287 - 3,815,834 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	3,812,287 - 3,815,834 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	20	5,891,721 - 5,895,165 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	20	4,968,251 - 4,972,149 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	20	6,430,305 - 6,433,771 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Ring1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	1,782,115 - 1,788,842 (+)	Ensembl
ChiLan1.0	NW_004955437	1,782,156 - 1,785,811 (+)	NCBI	ChiLan1.0	ChiLan1.0

RING1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	47,686,132 - 47,690,535 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	43,557,880 - 43,562,202 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	32,780,699 - 32,784,922 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	33,895,631 - 33,899,734 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	33,895,849 - 33,899,417 (+)	Ensembl			panPan2	panpan1.1

Ring1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	38,313,317 - 38,317,138 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	25,642,411 - 25,647,202 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	25,643,129 - 25,646,928 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RING1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	25,251,486 - 25,255,522 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	25,251,507 - 25,255,526 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	29,748,096 - 29,752,115 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RING1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	38,862,411 - 38,866,631 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	38,860,729 - 38,866,371 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	33,042,139 - 33,047,029 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ring1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	23,594,910 - 23,599,434 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	23,595,612 - 23,599,146 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ring1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	18	8,301,681 - 8,305,198 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in RING1
35 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001048128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ630366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000001442 ⟹ ENSCAFP00000001328

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	2,671,578 - 2,675,488 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845036439 ⟹ ENSCAFP00845028522

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	3,002,311 - 3,006,226 (+)	Ensembl

RefSeq Acc Id:

NM_001048128 ⟹ NP_001041593

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	2,671,578 - 2,675,488 (+)	NCBI
Dog10K_Boxer_Tasha	12	2,752,719 - 2,756,629 (+)	NCBI
ROS_Cfam_1.0	12	3,002,311 - 3,006,226 (+)	NCBI
UMICH_Zoey_3.1	12	2,670,496 - 2,674,406 (+)	NCBI
UNSW_CanFamBas_1.0	12	2,751,860 - 2,755,773 (+)	NCBI
UU_Cfam_GSD_1.0	12	2,826,435 - 2,830,348 (+)	NCBI

Sequence:

show sequence

GGCCCCAGCGCCCGGGCCATGGCGGCGGCGGCGGCGGGAGCTGCTGTCTGAGCAGCGGCTGCGG
ACCGAGCGGACTGGGGCCGGGAGCCCGGGCCGGGAGAGAGGCGCTGCGGCAGCGGGGCGCGGAC
GGCTGGAGCCGGCCTACCTCTCCTCCTCCTCCGCCGCAGCGGAGCCCCGGTGGGGGTCTGTGCC
CGGTCACCATGACGACGCCGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAACTGAGTCTGTA
CGAGCTCCACCGGACCCCGCAGGAAGCCATCATGGATGGCACAGAGATCGCGGTTTCCCCTCGG
TCACTGCATTCAGAACTCATGTGCCCCATCTGCCTGGACATGCTGAAGAATACCATGACCACCA
AGGAGTGCCTCCATCGATTCTGCTCTGACTGTATTGTCACAGCCCTGCGGAGCGGGAACAAGGA
GTGCCCCACCTGCCGCAAGAAGCTGGTATCCAAGCGGTCTCTGCGGCCAGACCCCAACTTTGAT
GCCCTGATCTCTAAGATCTATCCCAGCCGGGAGGAGTACGAGGCCCATCAAGACCGGGTGCTCA
TCCGCCTCAGTCGTCTGCACAACCAGCAGGCACTGAGCTCCAGCATTGAGGAGGGGCTGCGCAT
GCAGGCCATGCACAGGGCCCAGCGTGTGAGGCGGCCGATGCCCGGGTCAGATCAGACCACCACG
ATGAGTGGGGGGGAAGGAGAGCCTGGGGAGGGAGAGGGGGATGGAGAGGATGTGAGCTCAGACT
CCGCCCCTGACTCTGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGCGGGGGCGCGGGCGGGAG
CAGTGTAGGGACGGGGGGAGGCGGCGCTGGTGGGGTGGGTGGGGGCGCCGGTTCTGAAGACTCT
GGCGACCGAGGAGGGACCTTGGGAGGGGGAACCCTAGGCCCCCCGAGCCCTCCCGGGGCCCCCA
GCCCCCCGGAGCCAGGTGGAGAAATTGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGAGAA
GGGAGAATACTGCCAGACTAGGTATGTGAAGACAACCGGGAATGCCACAGTGGACCACCTTTCC
AAGTACTTGGCCCTGCGTATTGCCCTTGAGCGGAGGCAGCAGCAAGAGGCCGGGGAGCCAGGAG
GGCCTGGAGGGGGCGCCTCTGATGCCGGGGGACCTGATGGGGGTGGCGGGGAGGGTGGGGGTAC
CAGAGGCGGTGACGGCCCTGAGGAGCCTGCCTTGCCCAGTCTGGAAGGTGTCAGTGAAAAGCAG
TACACCATCTACATCGCCCCTGGGGGCGGAGCTTTCACGACACTGAATGGCTCGCTGACCCTGG
AACTGGTGAATGAGAAGTTCTGGAAGGTGTCCCGGCCACTGGAGCTCTGCTATGCCCCCACCAA
GGATCCAAAGTGACCCCACAAAGGGACAGCCAGAGGATGGGGACCATGGGATGTCCCTTTGTCC
TGGCCTACCACCCCCAGCTTCTTTGTCCCCCAGGGTCCCCCAACCTGGCCAGCCAGCAAGAGGA
CACAAATGAGGACAAGTGGCTTTTATACAAAGTATCTATATCAGATTCTTCTATATTGTACAGA
ACGGGGCATGCGCCCCCATCTACTGCCTTTTCTATTGCCCCCCCAACTTCCCAGCTATCTAAGA
TGTTGGGGAAGGTGAAGAACCCTCCCCTTCATGCCCTCCTACCAACAACAACAAGTTTGCTTCT
TTTCCTCTTTGAAACCTGCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001041593	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAI11434	(Get FASTA)	NCBI Sequence Viewer
	CAI11435	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000001328.3
	ENSCAFP00030021615.1
	ENSCAFP00040033601.1
	ENSCAFP00845028522
	ENSCAFP00845028522.1
GenBank Protein	Q5TJF3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001041593 ⟸ NM_001048128

- UniProtKB:

Q5TJF4 (UniProtKB/Swiss-Prot), Q5TJF3 (UniProtKB/Swiss-Prot), A0A8C0QUJ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKEC
LHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRL
SRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEGEPGEGEGDGEDVSSDSAP
DSAPGPAPKRPRGGGAGGSSVGTGGGGAGGVGGGAGSEDSGDRGGTLGGGTLGPPSPPGAPSPP
EPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALERRQQQEAGEPGGPG
GGASDAGGPDGGGGEGGGTRGGDGPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELV
NEKFWKVSRPLELCYAPTKDPK

hide sequence

Ensembl Acc Id:

ENSCAFP00000001328 ⟸ ENSCAFT00000001442

Ensembl Acc Id:

ENSCAFP00845028522 ⟸ ENSCAFT00845036439

Promoters

RGD ID:

13685374

Promoter ID:

EPDNEW_C3444

Type:

multiple initiation site

Name:

RING1_1

Description:

ring finger protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	2,671,575 - 2,671,635	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000933	Ensembl, UniProtKB/Swiss-Prot
	ENSCAFG00030013367	UniProtKB/Swiss-Prot
	ENSCAFG00040020808	UniProtKB/Swiss-Prot
	ENSCAFG00845020668	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSCAFT00000001442.5	UniProtKB/Swiss-Prot
	ENSCAFT00030024749.1	UniProtKB/Swiss-Prot
	ENSCAFT00040038530.1	UniProtKB/Swiss-Prot
	ENSCAFT00845036439	ENTREZGENE
	ENSCAFT00845036439.1	UniProtKB/Swiss-Prot
Gene3D-CATH	3.30.40.10	UniProtKB/Swiss-Prot
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/Swiss-Prot
InterPro	RAWUL	UniProtKB/Swiss-Prot
	RING1/RING2	UniProtKB/Swiss-Prot
	Znf_RING	UniProtKB/Swiss-Prot
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot
	Znf_RING_CS	UniProtKB/Swiss-Prot
KEGG Report	cfa:607905	UniProtKB/Swiss-Prot
NCBI Gene	RING1	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE RING1	UniProtKB/Swiss-Prot
	PTHR46076	UniProtKB/Swiss-Prot
Pfam	RAWUL	UniProtKB/Swiss-Prot
	zf-C3HC4_2	UniProtKB/Swiss-Prot
PROSITE	ZF_RING_1	UniProtKB/Swiss-Prot
	ZF_RING_2	UniProtKB/Swiss-Prot
SMART	RING	UniProtKB/Swiss-Prot
Superfamily-SCOP	RING/U-box	UniProtKB/Swiss-Prot
UniProt	A0A8C0QUJ9	ENTREZGENE
	Q5TJF3	ENTREZGENE
	Q5TJF4	ENTREZGENE
	RING1_CANLF	UniProtKB/Swiss-Prot
UniProt Secondary	Q5TJF4	UniProtKB/Swiss-Prot
VGNC ID	VGNC:45589	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

RGD Manual Annotations