SLC39A13 (solute carrier family 39 member 13) - Rat Genome Database

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Pathways
Gene: SLC39A13 (solute carrier family 39 member 13) Canis lupus familiaris
Analyze
Symbol: SLC39A13
Name: solute carrier family 39 member 13
RGD ID: 12172807
Description: ENCODES a protein that exhibits metal ion transmembrane transporter activity (inferred); protein homodimerization activity (inferred); zinc ion transmembrane transporter activity (inferred); INVOLVED IN response to zinc ion (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); bone disease (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasmic vesicle membrane (inferred); endoplasmic reticulum membrane (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: zinc transporter ZIP13
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11842,221,311 - 42,229,992 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1842,222,333 - 42,227,361 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1840,951,851 - 40,960,577 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01842,877,035 - 42,885,762 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1842,877,036 - 42,884,329 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11842,363,637 - 42,372,357 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01841,918,606 - 41,927,337 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01842,648,054 - 42,656,786 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SLC39A13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11842,221,311 - 42,229,992 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1842,222,333 - 42,227,361 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1840,951,851 - 40,960,577 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01842,877,035 - 42,885,762 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1842,877,036 - 42,884,329 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11842,363,637 - 42,372,357 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01841,918,606 - 41,927,337 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01842,648,054 - 42,656,786 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
SLC39A13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381147,407,276 - 47,416,500 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1147,407,132 - 47,416,587 (+)Ensemblhg38GRCh38
GRCh371147,428,827 - 47,438,051 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361147,386,758 - 47,394,623 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341147,386,757 - 47,394,622NCBI
Celera1147,571,745 - 47,579,746 (+)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1147,130,928 - 47,137,364 (+)NCBIHuRef
CHM1_11147,429,277 - 47,437,283 (+)NCBICHM1_1
T2T-CHM13v2.01147,566,179 - 47,575,404 (+)NCBIT2T-CHM13v2.0
Slc39a13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39290,892,136 - 90,900,754 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl290,892,136 - 90,900,762 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38291,061,781 - 91,070,441 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl291,061,791 - 91,070,417 (-)Ensemblmm10GRCm38
MGSCv37290,901,948 - 90,910,378 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36290,862,630 - 90,871,060 (-)NCBIMGSCv36mm8
Celera292,446,265 - 92,454,697 (-)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.44NCBI
Slc39a13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8397,495,229 - 97,504,279 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl397,495,229 - 97,505,052 (-)EnsemblGRCr8
mRatBN7.2377,039,411 - 77,047,528 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl377,037,565 - 77,049,226 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx380,517,903 - 80,525,744 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0389,116,918 - 89,124,755 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0386,968,086 - 86,975,910 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd395,304,285 - 95,312,122 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive3102,238,498 - 102,246,335 (-)NCBILyon_Normotensive
Lyon_Hypertensive394,156,275 - 94,164,108 (-)NCBILyon_Hypertensive
F344_StmMcwi375,437,891 - 75,445,728 (-)NCBIF344_StmMcwi
Rnor_6.0379,884,524 - 79,892,664 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl379,884,524 - 79,892,429 (-)Ensemblrn6Rnor6.0
Rnor_5.0386,593,277 - 86,601,315 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4375,421,153 - 75,429,058 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera376,248,117 - 76,256,038 (-)NCBICelera
RGSC_v3.1375,317,524 - 75,325,349 (-)NCBI
Cytogenetic Map3q24NCBI
Slc39a13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955422845,678 - 852,772 (-)Ensembl
ChiLan1.0NW_004955422845,076 - 852,772 (-)NCBIChiLan1.0ChiLan1.0
SLC39A13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2949,611,099 - 49,619,447 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11149,630,934 - 49,639,235 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01147,356,465 - 47,364,710 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11147,910,552 - 47,918,014 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,910,551 - 47,918,014 (+)EnsemblpanPan2panpan1.1
Slc39a13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494719,699,562 - 19,714,178 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365621,816,049 - 1,825,892 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365621,811,479 - 1,825,857 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC39A13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl215,194,017 - 15,210,425 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1215,194,028 - 15,202,936 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2216,400,675 - 16,409,565 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC39A13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1117,899,349 - 17,907,165 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl117,899,030 - 17,905,850 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038115,200,824 - 115,208,776 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc39a13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247671,368,965 - 1,375,586 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247671,368,965 - 1,376,378 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Slc39a13
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1565,230,153 - 65,238,186 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in SLC39A13
122 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014121299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_533188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000013850   ⟹   ENSCAFP00000012813
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1842,222,333 - 42,227,361 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000083010   ⟹   ENSCAFP00000056369
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1842,222,333 - 42,227,361 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845037902   ⟹   ENSCAFP00845029700
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1842,877,036 - 42,884,329 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845037991   ⟹   ENSCAFP00845029770
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1842,877,040 - 42,884,327 (-)Ensembl
RefSeq Acc Id: XM_014121299   ⟹   XP_013976774
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,228,616 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,959,130 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014121301   ⟹   XP_013976776
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,228,594 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,959,130 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014121302   ⟹   XP_013976777
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,229,979 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,960,577 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014121304   ⟹   XP_013976779
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,228,616 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,959,130 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022405450   ⟹   XP_022261158
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,229,983 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,960,577 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022405451   ⟹   XP_022261159
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,228,594 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,959,130 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038424372   ⟹   XP_038280300
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,884,314 (-)NCBI
RefSeq Acc Id: XM_038424373   ⟹   XP_038280301
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,885,762 (-)NCBI
RefSeq Acc Id: XM_038424374   ⟹   XP_038280302
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,884,314 (-)NCBI
RefSeq Acc Id: XM_038424375   ⟹   XP_038280303
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,885,762 (-)NCBI
RefSeq Acc Id: XM_038424376   ⟹   XP_038280304
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,884,314 (-)NCBI
RefSeq Acc Id: XM_038424377   ⟹   XP_038280305
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,884,314 (-)NCBI
RefSeq Acc Id: XM_038424378   ⟹   XP_038280306
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,877,035 - 42,884,314 (-)NCBI
RefSeq Acc Id: XM_038424379   ⟹   XP_038280307
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,878,425 - 42,884,314 (-)NCBI
RefSeq Acc Id: XM_038454013   ⟹   XP_038309941
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,953,241 - 40,959,130 (-)NCBI
RefSeq Acc Id: XM_038500713   ⟹   XP_038356641
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,370,916 (-)NCBI
RefSeq Acc Id: XM_038500714   ⟹   XP_038356642
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,372,357 (-)NCBI
RefSeq Acc Id: XM_038500715   ⟹   XP_038356643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,370,916 (-)NCBI
RefSeq Acc Id: XM_038500716   ⟹   XP_038356644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,372,357 (-)NCBI
RefSeq Acc Id: XM_038500717   ⟹   XP_038356645
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,370,916 (-)NCBI
RefSeq Acc Id: XM_038500718   ⟹   XP_038356646
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,370,916 (-)NCBI
RefSeq Acc Id: XM_038500719   ⟹   XP_038356647
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,363,637 - 42,370,916 (-)NCBI
RefSeq Acc Id: XM_038500720   ⟹   XP_038356648
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,365,027 - 42,370,916 (-)NCBI
RefSeq Acc Id: XM_038563304   ⟹   XP_038419232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,655,333 (-)NCBI
RefSeq Acc Id: XM_038563305   ⟹   XP_038419233
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,656,786 (-)NCBI
RefSeq Acc Id: XM_038563306   ⟹   XP_038419234
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,655,333 (-)NCBI
RefSeq Acc Id: XM_038563307   ⟹   XP_038419235
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,656,785 (-)NCBI
RefSeq Acc Id: XM_038563309   ⟹   XP_038419237
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,655,333 (-)NCBI
RefSeq Acc Id: XM_038563310   ⟹   XP_038419238
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,655,333 (-)NCBI
RefSeq Acc Id: XM_038563311   ⟹   XP_038419239
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,648,054 - 42,655,333 (-)NCBI
RefSeq Acc Id: XM_038563312   ⟹   XP_038419240
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,649,444 - 42,655,333 (-)NCBI
RefSeq Acc Id: XM_038627426   ⟹   XP_038483354
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,925,884 (-)NCBI
RefSeq Acc Id: XM_038627427   ⟹   XP_038483355
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,927,337 (-)NCBI
RefSeq Acc Id: XM_038627428   ⟹   XP_038483356
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,925,884 (-)NCBI
RefSeq Acc Id: XM_038627429   ⟹   XP_038483357
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,927,336 (-)NCBI
RefSeq Acc Id: XM_038627430   ⟹   XP_038483358
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,925,884 (-)NCBI
RefSeq Acc Id: XM_038627431   ⟹   XP_038483359
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,925,884 (-)NCBI
RefSeq Acc Id: XM_038627432   ⟹   XP_038483360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,918,606 - 41,925,884 (-)NCBI
RefSeq Acc Id: XM_038627433   ⟹   XP_038483361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,919,995 - 41,925,884 (-)NCBI
RefSeq Acc Id: XM_533188   ⟹   XP_533188
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,221,311 - 42,228,594 (-)NCBI
Dog10K_Boxer_Tasha1840,951,851 - 40,959,130 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013976774 (Get FASTA)   NCBI Sequence Viewer  
  XP_013976776 (Get FASTA)   NCBI Sequence Viewer  
  XP_013976777 (Get FASTA)   NCBI Sequence Viewer  
  XP_013976779 (Get FASTA)   NCBI Sequence Viewer  
  XP_022261158 (Get FASTA)   NCBI Sequence Viewer  
  XP_022261159 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280300 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280301 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280302 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280303 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280304 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280305 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280306 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280307 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309941 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356641 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356642 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356643 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356644 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356645 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356646 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356647 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356648 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419232 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419233 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419234 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419235 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419237 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419238 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419239 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419240 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483354 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483355 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483356 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483357 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483358 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483359 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483361 (Get FASTA)   NCBI Sequence Viewer  
  XP_533188 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000012813.5
  ENSCAFP00000056369.2
  ENSCAFP00030006638.1
  ENSCAFP00040013637.1
  ENSCAFP00040013652.1
  ENSCAFP00845029700
  ENSCAFP00845029700.1
  ENSCAFP00845029770
  ENSCAFP00845029770.1
RefSeq Acc Id: XP_013976777   ⟸   XM_014121302
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013976779   ⟸   XM_014121304
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013976774   ⟸   XM_014121299
- Peptide Label: isoform X1
- UniProtKB: A0A8I3S505 (UniProtKB/TrEMBL),   A0A8P0NB15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_533188   ⟸   XM_533188
- Peptide Label: isoform X5
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013976776   ⟸   XM_014121301
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022261158   ⟸   XM_022405450
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022261159   ⟸   XM_022405451
- Peptide Label: isoform X6
- UniProtKB: A0A8C0QH15 (UniProtKB/TrEMBL),   A0A8I3PFT8 (UniProtKB/TrEMBL),   A0A8P0P5Q4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000056369   ⟸   ENSCAFT00000083010
Ensembl Acc Id: ENSCAFP00000012813   ⟸   ENSCAFT00000013850
RefSeq Acc Id: XP_038356644   ⟸   XM_038500716
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038356642   ⟸   XM_038500714
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038356647   ⟸   XM_038500719
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038356646   ⟸   XM_038500718
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038356643   ⟸   XM_038500715
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038356645   ⟸   XM_038500717
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038356641   ⟸   XM_038500713
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356648   ⟸   XM_038500720
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038483355   ⟸   XM_038627427
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038483357   ⟸   XM_038627429
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038483360   ⟸   XM_038627432
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038483359   ⟸   XM_038627431
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483356   ⟸   XM_038627428
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038483358   ⟸   XM_038627430
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038483354   ⟸   XM_038627426
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483361   ⟸   XM_038627433
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038280303   ⟸   XM_038424375
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280301   ⟸   XM_038424373
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038280306   ⟸   XM_038424378
- Peptide Label: isoform X6
- UniProtKB: A0A8C0QH15 (UniProtKB/TrEMBL),   A0A8I3PFT8 (UniProtKB/TrEMBL),   A0A8P0P5Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280305   ⟸   XM_038424377
- Peptide Label: isoform X5
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280302   ⟸   XM_038424374
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280304   ⟸   XM_038424376
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038280300   ⟸   XM_038424372
- Peptide Label: isoform X1
- UniProtKB: A0A8I3S505 (UniProtKB/TrEMBL),   A0A8P0NB15 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280307   ⟸   XM_038424379
- Peptide Label: isoform X7
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309941   ⟸   XM_038454013
- Peptide Label: isoform X7
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419233   ⟸   XM_038563305
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038419235   ⟸   XM_038563307
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419239   ⟸   XM_038563311
- Peptide Label: isoform X6
- UniProtKB: A0A8C0QH15 (UniProtKB/TrEMBL),   A0A8I3PFT8 (UniProtKB/TrEMBL),   A0A8P0P5Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419238   ⟸   XM_038563310
- Peptide Label: isoform X5
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419234   ⟸   XM_038563306
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419237   ⟸   XM_038563309
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038419232   ⟸   XM_038563304
- Peptide Label: isoform X1
- UniProtKB: A0A8I3S505 (UniProtKB/TrEMBL),   A0A8P0NB15 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419240   ⟸   XM_038563312
- Peptide Label: isoform X7
- UniProtKB: A0A8C0MBC1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845029770   ⟸   ENSCAFT00845037991
Ensembl Acc Id: ENSCAFP00845029700   ⟸   ENSCAFT00845037902


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000008717 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030004084 UniProtKB/TrEMBL
  ENSCAFG00040008390 UniProtKB/TrEMBL
  ENSCAFG00845021469 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000013850.5 UniProtKB/TrEMBL
  ENSCAFT00000083010.2 UniProtKB/TrEMBL
  ENSCAFT00030007576.1 UniProtKB/TrEMBL
  ENSCAFT00040015730.1 UniProtKB/TrEMBL
  ENSCAFT00040015744.1 UniProtKB/TrEMBL
  ENSCAFT00845037902 ENTREZGENE
  ENSCAFT00845037902.1 UniProtKB/TrEMBL
  ENSCAFT00845037991 ENTREZGENE
  ENSCAFT00845037991.1 UniProtKB/TrEMBL
InterPro ZIP UniProtKB/TrEMBL
KEGG Report cfa:475981 UniProtKB/TrEMBL
NCBI Gene SLC39A13 ENTREZGENE
PANTHER ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 UniProtKB/TrEMBL
  ZINC TRANSPORTER ZIP13 UniProtKB/TrEMBL
Pfam Zip UniProtKB/TrEMBL
UniProt A0A8C0MBC1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QH15 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PFT8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S505 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NB15 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P5Q4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:56096 ENTREZGENE