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Strain Registration

Strain: SS-Bcas3em4Mcwi

Symbol: SS-Bcas3em4Mcwi
Strain: SS-Bcas3em4
Substrain: Mcwi
RGD ID: 5508361
Citation ID: RRID:RGD_5508361
Ontology ID: RS:0002924
Alleles: Bcas3em4Mcwi
Also Known As: SS-Bcas3em4Mcwi; SS-Bcas3^[em4Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen Knockouts
Description: This strain was produced by injecting ZFNs targeting the sequence TGGATCTGTACTCACttcgtACGGGGGAGATGGTCAAG into SS/JrHsdMcwi rat embryos. The resulting mutation is a 7-bp frameshift deletion in exon 9.
Last Known Status: Cryopreserved Sperm (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21070,213,710 - 70,673,080RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01072,756,587 - 72,756,593RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01072,660,671 - 73,177,317RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41073,617,547 - 74,078,190RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Bcas3em4Mcwi-var1 chr10 72756587 72756593 TTCGTAC - deletion Rnor_6.0

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-26 SS-Bcas3em4Mcwi    SS-Bcas3em4Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Bcas3em4Mcwi    SS-Bcas3em4Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Bcas3em4Mcwi    SS-Bcas3em4Mcwi    Name updated 68913 APPROVED
2014-03-26 SS-Bcas3em4Mcwi    SS-Bcas3em4Mcwi    Name updated 68913 APPROVED
2013-08-14 SS-Bcas3em4Mcwi    SS-Bcas3em4Mcwi    Name updated 68913 APPROVED
2013-08-14 SS-Bcas3em4Mcwi    SS-Bcas3em4Mcwi    Name updated 68913 APPROVED