rs732527 Rat Genome Database

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Variant: rs732527 -  Homo sapiens

RGD ID: 151267855
RS ID: rs732527
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: FLNB  
Reference Nucleotide: T
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh38 3 58,051,208
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs732527Humantotal reticulocyte count  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:27863252

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs732527Humanreticulocyte count  IAGP 405850206 GWAS_CATALOGPMID:27863252
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS546158_H GCST004611 High light scatter reticulocyte count 170,761 European ancestry individuals C 0.3585 4E-18 17.398 rs732527 0.0327628 reticulocyte count (EFO:0007986)
 PMID:27863252
GWAS616788_H GCST004612 High light scatter reticulocyte percentage of red cells 170,763 European ancestry individuals C 0.3585 9E-19 18.046 rs732527 0.0333776 reticulocyte count (EFO:0007986)
 PMID:27863252
GWAS624141_H GCST004628 Immature fraction of reticulocytes 170,548 European ancestry individuals C 0.3585 1E-16 16 rs732527 0.03087325 reticulocyte count (EFO:0007986)
 PMID:27863252

Variant Details
Variant Transcripts
Gene Symbol:FLNB
Accession:NM_001164317
Location:INTRON

Gene Symbol:FLNB
Accession:NM_001457
Location:INTRON

Gene Symbol:FLNB
Accession:NM_001164318
Location:INTRON

Gene Symbol:FLNB
Accession:NM_001164319
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST004612 GWAS Catalog
  GCST004628 GWAS Catalog