rs3820687 Rat Genome Database

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Variant: rs3820687 -  Homo sapiens

RGD ID: 155881605
RS ID: rs3820687
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LINC00339  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh38 1 22,030,736
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
rs3820687Humanhip circumference  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
rs3820687HumanBMI-adjusted hip circumference  IAGP 405850206 GWAS_CATALOGPMID:34021172
Data has come from the GWAS Catalog   
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1598977_H GCST012227 Hip circumference adjusted for BMI 186,825 British ancestry men T NR 3E-10 9.523 rs3820687 0.0230769 BMI-adjusted hip circumference (EFO:0008039)
 PMID:34021172

Gene Symbol:LINC00339
Accession:NR_023918
Location:EXON;NON-CODING

Gene Symbol:LINC00339
Accession:NR_109760
Location:EXON;NON-CODING

Gene Symbol:LINC00339
Accession:NR_109762
Location:EXON;NON-CODING

Gene Symbol:LINC00339
Accession:NR_023919
Location:EXON;NON-CODING

Gene Symbol:LINC00339
Accession:NR_109761
Location:EXON;NON-CODING

Gene Symbol:LINC00339
Accession:NR_109759
Location:EXON;NON-CODING

.


Database
Acc Id
Source(s)
GWAS Catalog GCST012227 GWAS Catalog