rs3810194 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Variant: rs3810194 -  Homo sapiens

RGD ID: 155818527
RS ID: rs3810194
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: FCGRT  
Reference Nucleotide: T
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh38 19 49,524,783
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs3810194Humanlevel of IgG receptor FcRn large subunit p51 in blood serum  IAGP 405850206 GWAS_CATALOGPMID:35870639
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS641006_H GCST90235823 IgG receptor FcRn large subunit p51 level in Chronic kidney disease with hypertension and no diabetes (21708_149) 466 African American individuals C 0.18 2E-20 19.699 rs3810194 0.75 PMID:35870639

Variant Details
Variant Transcripts
Gene Symbol:FCGRT
Accession:NM_004107
Location:INTRON

Gene Symbol:FCGRT
Accession:XM_047438408
Location:INTRON

Gene Symbol:FCGRT
Accession:XM_047438410
Location:INTRON

Gene Symbol:FCGRT
Accession:NM_001411064
Location:INTRON

Gene Symbol:FCGRT
Accession:XM_047438412
Location:INTRON

Gene Symbol:FCGRT
Accession:NM_001136019
Location:INTRON

Gene Symbol:FCGRT
Accession:XM_047438411
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST90235823 GWAS Catalog