rs200396883 Rat Genome Database

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Variant: rs200396883 -  Homo sapiens

RGD ID: 406224921
RS ID: rs200396883
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: FLNB  
Reference Nucleotide: G
Variant Nucleotide: ?
Position
Assembly Chr Position
GRCh38 3 58,045,474
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs200396883Humanbody height  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:33713608

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs200396883Humanbody height  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:33713608

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs200396883Humanbody height  IAGP 405850206 GWAS_CATALOGPMID:33713608
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
body height  (IAGP)

Vertebrate Trait
body height  (IAGP)

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS859407_H GCST90013466 Height 41,389 African ancestry individuals ? 0.83 4E-8 7.398 rs200396883 0.056 body height (EFO:0004339)
 PMID:33713608
GWAS862483_H GCST90013468 Height 25,369 African ancestry women ? 0.831 0.000004 5.398 rs200396883 0.059 body height (EFO:0004339)
 PMID:33713608

Variant Details
Variant Transcripts
Gene Symbol:FLNB
Accession:NM_001164317
Location:INTRON

Gene Symbol:FLNB
Accession:NM_001457
Location:INTRON

Gene Symbol:FLNB
Accession:NM_001164318
Location:INTRON

Gene Symbol:FLNB
Accession:NM_001164319
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST90013466 GWAS Catalog
  GCST90013468 GWAS Catalog