rs183754410 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Variant: rs183754410 -  Homo sapiens

RGD ID: 155828396
RS ID: rs183754410
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ATOSA  LOC105370821  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh38 15 52,685,005
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
rs183754410Humangut microbiome measurement  IAGP 405850206 GWAS_CATALOGPMID:35115689
Data has come from the GWAS Catalog   
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1581342_H GCST90032350 Dysgonomonadaceae abundance in stool 5,959 Finnish ancestry individuals T 0.0191984 3E-8 7.523 rs183754410 0.114535 gut microbiome measurement (EFO:0007874)
 PMID:35115689

Gene Symbol:ATOSA
Accession:NM_001385021
Location:5UTRS;INTRON

Gene Symbol:ATOSA
Accession:NM_001385013
Location:5UTRS;INTRON

Gene Symbol:ATOSA
Accession:NM_001385019
Location:5UTRS;INTRON

Gene Symbol:ATOSA
Accession:NM_001385014
Location:5UTRS;INTRON

Gene Symbol:ATOSA
Accession:XM_047432861
Location:5UTRS;INTRON

Gene Symbol:LOC105370821
Accession:XR_932252
Location:EXON;NON-CODING

Gene Symbol:LOC105370821
Accession:XR_932254
Location:EXON;NON-CODING

Gene Symbol:LOC105370821
Accession:XR_932255
Location:EXON;NON-CODING

Gene Symbol:LOC105370821
Accession:XR_932253
Location:EXON;NON-CODING

Gene Symbol:ATOSA
Accession:NM_019600
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001286495
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_024449991
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385015
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385022
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385016
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385023
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385017
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385018
Location:INTRON

Gene Symbol:ATOSA
Accession:NM_001385020
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_047432863
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_047432862
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_047432857
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_047432859
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_047432860
Location:INTRON

Gene Symbol:ATOSA
Accession:XM_047432858
Location:INTRON

Gene Symbol:ATOSA
Accession:NR_104457
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169538
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169536
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169544
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169545
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169547
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169543
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169542
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169549
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169552
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169551
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169533
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169537
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169539
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169540
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169541
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169534
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169546
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169535
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169548
Location:INTRON;NON-CODING

Gene Symbol:ATOSA
Accession:NR_169550
Location:INTRON;NON-CODING

Gene Symbol:LOC105370821
Accession:XR_007064639
Location:INTRON;NON-CODING

.


Database
Acc Id
Source(s)
GWAS Catalog GCST90032350 GWAS Catalog