rs147119990 Rat Genome Database

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Variant: rs147119990 -  Homo sapiens

RGD ID: 151265570
RS ID: rs147119990
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: TAMM41  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh38 3 11,750,143
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs147119990Humanclopidogrel metabolite measurement  IAGP 405850206 GWAS_CATALOGPMID:28207573
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS612498_H GCST004264 Clopidogrel active metabolite levels 513 Amish individuals A 0.01 2E-9 8.699 rs147119990 20.21 clopidogrel metabolite measurement (EFO:0007966)
 PMID:28207573

Variant Details
Variant Transcripts
Gene Symbol:TAMM41
Accession:NM_001321295
Location:INTRON

Gene Symbol:TAMM41
Accession:NM_001284401
Location:INTRON

Gene Symbol:TAMM41
Accession:XM_047447457
Location:INTRON

Gene Symbol:TAMM41
Accession:NM_138807
Location:INTRON

Gene Symbol:TAMM41
Accession:XM_017005725
Location:INTRON

Gene Symbol:TAMM41
Accession:XM_017005726
Location:INTRON

Gene Symbol:TAMM41
Accession:NM_001366031
Location:INTRON

Gene Symbol:TAMM41
Accession:XM_005264875
Location:INTRON

Gene Symbol:TAMM41
Accession:NM_001394474
Location:INTRON

Gene Symbol:TAMM41
Accession:NM_001321294
Location:INTRON

Gene Symbol:TAMM41
Accession:NR_135611
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_135610
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_158711
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_158712
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_104314
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_158713
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_135609
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_158710
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_158714
Location:INTRON;NON-CODING

Gene Symbol:TAMM41
Accession:NR_158715
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST004264 GWAS Catalog