rs12548275 Rat Genome Database

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Variant: rs12548275 -  Homo sapiens

RGD ID: 155867578
RS ID: rs12548275
Genic Status: INTERGENIC
Type: SNV (SO:0001483) 
Reference Nucleotide: G
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh38 8 50,822,165
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs12548275Humanmean arterial blood pressure  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:34594039
rs12548275Humansystolic blood pressure  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:37106081

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs12548275Humanmean arterial pressure  IAGP 405850206 GWAS_CATALOGPMID:34594039
rs12548275Humansystolic blood pressure  IAGP 405850206 GWAS_CATALOGPMID:37106081
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS582157_H GCST90267304 Systolic blood pressure (standard GWA) 275,793 European ancestry individuals T NR 4E-8 7.398 rs12548275 0.38127 systolic blood pressure (EFO:0006335)
PMID:37106081
GWAS992074_H GCST90018963 Mean arterial pressure 360,863 European ancestry individuals, 145,502 East Asian ancestry individuals T NR 4E-12 11.398 rs12548275 0.0169 mean arterial pressure (EFO:0006340)
PMID:34594039

Variant Details
Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST90018963 GWAS Catalog