GWAS1758011_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1758011_H (cholesteryl esters:total lipids ratio, blood VLDL cholesterol amount QTL GWAS1758011 (human)) Homo sapiens

Symbol: GWAS1758011_H
Name: cholesteryl esters:total lipids ratio, blood VLDL cholesterol amount QTL GWAS1758011 (human)
RGD ID: 598038712
Trait: cholesteryl esters:total lipids ratio, blood VLDL cholesterol amount
LOD Score: Not Available
P Value: 1.0E-16
Variance: Not Available
Position No map positions available.
Population Stats: Not Available




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs10468017)
Human AssemblyChrPosition (strand)Source
GRCh381558,386,313 - 58,386,314RGD_MAPPER_PIPELINE



1 to 20 of 166 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1758011_H GCST90092971 Cholesteryl esters to total lipids ratio in small VLDL 115,082 European ancestry individuals C 0.704063 1E-16 16 rs10468017 0.0370371 cholesteryl esters:total lipids ratio (EFO:0020944)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:35213538
GWAS1113073_H GCST007143 Total cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C 0.715 4E-23 22.398 rs10468017 0.05 total cholesterol measurement (EFO:0004574)
PMID:29507422
GWAS1113074_H GCST007143 Total cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C NR 4E-27 26.398 rs10468017 0.051 total cholesterol measurement (EFO:0004574)
PMID:29507422
GWAS1678499_H GCST90428432 Stem cell factor levels 74,780 European ancestry individuals ? 0.306589999999999 3E-8 7.523 rs10468017 0.03393467 kit ligand measurement (EFO:0010612)
PMID:39794498
GWAS1635918_H GCST90479631 high density lipoprotein cholesterol (HDLC, maximum, inv-norm transformed) 113,085 African American or Afro-Caribbean individuals, 54,914 Hispanic or Latin American individuals, 6,005 East Asian ancestry individuals, 404,121 European ancestry individuals C 0.7468 1E-323 323 rs10468017 0.1374 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:39024449
GWAS1650841_H GCST90475338 hematocrit (maximum, inv-norm transformed) 407,836 European ancestry individuals C 0.7143 4E-11 10.398 rs10468017 0.01856 hematocrit (EFO:0004348)
PMID:39024449
GWAS1738412_H GCST90091640 Fasting phospholipid levels in very small VLDL null T 0.295905748 4E-15 14.398 rs10468017 0.175423 phospholipid measurement (EFO:0004639)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1738448_H GCST90091635 Fasting total cholesterol in very small VLDL null T 0.295905748 1E-14 14 rs10468017 0.172103 blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1738457_H GCST90091639 Fasting very small VLDL particle concentration null T 0.295905748 1E-13 13 rs10468017 0.165281 blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1738563_H GCST90091636 Fasting cholesterol esters in very small VLDL null T 0.295905748 3E-14 13.523 rs10468017 0.169186 esterified cholesterol measurement (EFO:0008589)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1739036_H GCST90091777 Postprandial free cholesterol in very small VLDL null T 0.299324822 5E-13 12.302 rs10468017 0.167478 free cholesterol measurement (EFO:0008591)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1739098_H GCST90091637 Fasting free cholesterol in very small VLDL null T 0.295905748 2E-14 13.699 rs10468017 0.170628 free cholesterol measurement (EFO:0008591)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1739129_H GCST90091778 Postprandial total lipids in very small VLDL null T 0.299324822 6E-11 10.222 rs10468017 0.151977 lipid measurement (EFO:0004529)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1739137_H GCST90091779 Postprandial very small VLDL particle concentration null T 0.299324822 2E-10 9.699 rs10468017 0.146823 blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1739228_H GCST90091780 Postprandial phospholipid levels in very small VLDL null T 0.299324822 4E-12 11.398 rs10468017 0.160951 phospholipid measurement (EFO:0004639)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
None Available GCST90091638 Fasting total lipids in very small VLDL null T 0.295905748 3E-14 13.523 rs10468017 0.169067 lipid measurement (EFO:0004529)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:34610981
GWAS1748720_H GCST90093021 Free cholesterol to total lipids ratio in very large VLDL 114,160 European ancestry individuals C 0.704314 4E-95 94.398 rs10468017 0.0907263 free cholesterol:total lipids ratio (EFO:0020945)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:35213538
GWAS1749534_H GCST90093027 Triglycerides to total lipids ratio in very large VLDL 114,160 European ancestry individuals C 0.704314 9E-49 48.046 rs10468017 0.0643345 triglycerides:total lipids ratio (EFO:0020947)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:35213538
GWAS1755908_H GCST90302147 Phospholipids to total lipids ratio in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 110,896 European ancestry individuals T 0.2975 6E-25 24.222 rs10468017 0.0488 phospholipids:total lipids ratio (EFO:0020946)
blood VLDL cholesterol amount (OBA:VT0005144)
PMID:38448586
GWAS1756373_H GCST90302171 Phospholipids to total lipids ratio in chylomicrons and extremely large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 110,896 European ancestry individuals T 0.2985 2E-21 20.699 rs10468017 0.0435 phospholipids:total lipids ratio (EFO:0020946)
blood VLDL cholesterol amount (OBA:VT0005144)
chylomicron amount (OBA:2050296)
PMID:38448586
1 to 20 of 166 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST90060137 GWAS Catalog
  GCST90092971 GWAS Catalog

Note Type Note Reference