GWAS1727580_H QTL Report (Homo sapiens) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: GWAS1727580_H (blood insulin amount QTL GWAS1727580 (human)) Homo sapiens

Symbol: GWAS1727580_H
Name: blood insulin amount QTL GWAS1727580 (human)
RGD ID: 598008281
Trait: blood insulin amount
LOD Score: Not Available
P Value: 7.0E-11
Variance: Not Available
Position No map positions available.
Population Stats: Not Available



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1727580_HHumanblood insulin amount  IAGPrs7903146405850206 GWAS_CATALOGPMID:33402679

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs7903146)
Human AssemblyChrPosition (strand)Source
GRCh3810112,998,590 - 112,998,591RGD_MAPPER_PIPELINE



1 to 20 of 323 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1727580_H GCST012079 Fasting insulin 105,056 European ancestry individuals C 0.713199 7E-11 10.155 rs7903146 0.017926 blood insulin amount (OBA:VT0001560)
 PMID:33402679
GWAS1699246_H GCST004066 Hip circumference up to 56,910 European ancestry men, up to 86,570 European ancestry women T 0.2858 7E-8 7.155 rs7903146 0.0298 hip circumference (OBA:1000032)
 PMID:25673412
GWAS1699365_H GCST001526 Fasting blood insulin (BMI interaction) Up to 51,750 European ancestry individuals T 0.2871 0.000003 5.523 rs7903146 7.362E-4 body mass index (EFO:0004340)
blood insulin amount (OBA:VT0001560)
 PMID:22581228
GWAS1699378_H GCST001527 Fasting blood glucose (BMI interaction) Up to 58,074 European ancestry individuals T 0.2886 2E-14 13.699 rs7903146 0.0024 obsolete_fasting blood glucose measurement (EFO:0004465)
body mass index (EFO:0004340)
 PMID:22581228
GWAS1699445_H GCST005186 Fasting blood glucose Up to 58,074 European ancestry individuals T 0.2876 1E-9 9 rs7903146 0.0212 obsolete_fasting blood glucose measurement (EFO:0004465)
 PMID:22581228
GWAS1699452_H GCST005185 Fasting blood insulin Up to 51,750 European ancestry individuals T 0.2724 3E-7 6.523 rs7903146 0.0185 blood insulin amount (OBA:VT0001560)
 PMID:22581228
None Available GCST004066 Hip circumference up to 56,910 European ancestry men, up to 86,570 European ancestry women T 0.2858 0.000003 5.523 rs7903146 0.0239 hip circumference (OBA:1000032)
 PMID:25673412
GWAS1699596_H GCST004066 Hip circumference up to 56,910 European ancestry men, up to 86,570 European ancestry women T 0.2858 2E-11 10.699 rs7903146 0.0264 hip circumference (OBA:1000032)
 PMID:25673412
GWAS539606_H GCST000712 Type 2 diabetes 8,130 European ancestry cases, 38,987 European ancestry controls T NR 2E-51 50.699 rs7903146 1.4 PMID:20581827
GWAS1115971_H GCST005951 Body mass index up to 309,889 European ancestry individuals T 0.28797015591893 3E-13 12.523 rs7903146 0.021989034 body mass index (EFO:0004340)
 PMID:26426971
GWAS1117618_H GCST004758 Type 2 diabetes 2,499 Hispanic/Latino ancestry cases, 5,247 Hispanic/Latino ancestry controls T 0.25 1E-11 11 rs7903146 1.36 PMID:28254843
GWAS1635325_H GCST90475685 Polyneuropathy in diabetes (PheCode 250.6) 4,528 African American or Afro-Caribbean cases, 114,074 African American or Afro-Caribbean controls C 0.7058 2E-22 21.699 rs7903146 0.226 PMID:39024449
GWAS1635335_H GCST90475686 Polyneuropathy in diabetes (PheCode 250.6) 18,533 European ancestry cases, 421,371 European ancestry controls C 0.7051 1E-76 76 rs7903146 0.2019 PMID:39024449
GWAS1635337_H GCST90479652 PT international normalized ratio (INR, minimum, inv-norm transformed) 49,241 African American or Afro-Caribbean individuals, 23,426 Hispanic or Latin American individuals, 1,793 East Asian ancestry individuals, 165,202 European ancestry individuals C 0.7101 9E-13 12.046 rs7903146 0.02501 prothrombin time measurement (EFO:0008390)
 PMID:39024449
GWAS1635531_H GCST90479639 hemoglobin (mean, inv-norm transformed) 114,985 African American or Afro-Caribbean individuals, 55,838 Hispanic or Latin American individuals, 5,963 East Asian ancestry individuals, 407,894 European ancestry individuals C 0.7102 1E-33 33 rs7903146 0.03128 hemoglobin measurement (EFO:0004509)
 PMID:39024449
GWAS1635615_H GCST90479630 hematocrit (minimum, inv-norm transformed) 114,988 African American or Afro-Caribbean individuals, 55,841 Hispanic or Latin American individuals, 5,964 East Asian ancestry individuals, 407,854 European ancestry individuals C 0.7102 1E-31 31 rs7903146 0.02994 hematocrit (EFO:0004348)
 PMID:39024449
GWAS1635751_H GCST90479629 hematocrit (mean, inv-norm transformed) 114,988 African American or Afro-Caribbean individuals, 55,841 Hispanic or Latin American individuals, 5,964 East Asian ancestry individuals, 407,852 European ancestry individuals C 0.7102 2E-43 42.699 rs7903146 0.03734 hematocrit (EFO:0004348)
 PMID:39024449
GWAS1635803_H GCST90475753 Hyperpotassemia (PheCode 276.13) 17,226 European ancestry cases, 415,141 European ancestry controls C 0.7047 2E-21 20.699 rs7903146 0.1095 Abnormality of metabolism/homeostasis (HP:0001939)
 PMID:39024449
GWAS1635859_H GCST90475735 Gout (PheCode 274.1) 42,034 European ancestry cases, 397,989 European ancestry controls C 0.7041 2E-12 11.699 rs7903146 0.05243 gout (EFO:0004274)
 PMID:39024449
None Available GCST90479638 hemoglobin (maximum, inv-norm transformed) 114,984 African American or Afro-Caribbean individuals, 55,834 Hispanic or Latin American individuals, 5,963 East Asian ancestry individuals, 407,887 European ancestry individuals C 0.7102 1E-33 33 rs7903146 0.03264 hemoglobin measurement (EFO:0004509)
 PMID:39024449
1 to 20 of 323 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST012079 GWAS Catalog

Note Type Note Reference