GWAS1693078_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1693078_H (triglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1693078 (human)) Homo sapiens

Symbol: GWAS1693078_H
Name: triglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1693078 (human)
RGD ID: 597825687
Trait: triglycerides:total lipids ratio, high density lipoprotein cholesterol measurement
LOD Score: Not Available
P Value: 2.0E-26
Variance: Not Available
Position No map positions available.
Population Stats: Not Available




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs150844304)
Human AssemblyChrPosition (strand)Source
GRCh381543,434,427 - 43,434,428RGD_MAPPER_PIPELINE



1 to 20 of 180 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1693078_H GCST90093015 Triglycerides to total lipids ratio in very large HDL 115,056 European ancestry individuals A 0.974323 2E-26 25.699 rs150844304 0.130783 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:35213538
GWAS1120737_H GCST007140 High density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals A 0.97 5E-21 20.302 rs150844304 0.104 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:29507422
GWAS1120738_H GCST007140 High density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals A NR 1E-24 24 rs150844304 0.108 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:29507422
GWAS1640438_H GCST90479669 mean corpuscular hemoglobin concentration (MCHC, maximum, inv-norm transformed) 114,857 African American or Afro-Caribbean individuals, 55,793 Hispanic or Latin American individuals, 5,943 East Asian ancestry individuals, 407,343 European ancestry individuals A 0.9775 2E-16 15.699 rs150844304 0.08 mean corpuscular hemoglobin concentration (EFO:0004528)
PMID:39024449
GWAS1641318_H GCST90479672 mean corpuscular hemoglobin (MCH, maximum, inv-norm transformed) 114,852 African American or Afro-Caribbean individuals, 55,783 Hispanic or Latin American individuals, 5,942 East Asian ancestry individuals, 407,288 European ancestry individuals A 0.9775 1E-11 11 rs150844304 0.07879 mean corpuscular hemoglobin concentration (EFO:0004528)
PMID:39024449
GWAS1641537_H GCST90479673 mean corpuscular hemoglobin (MCH, mean, inv-norm transformed) 114,855 African American or Afro-Caribbean individuals, 55,792 Hispanic or Latin American individuals, 5,944 East Asian ancestry individuals, 407,342 European ancestry individuals A 0.9775 4E-12 11.398 rs150844304 0.08125 mean corpuscular hemoglobin concentration (EFO:0004528)
PMID:39024449
GWAS1121738_H GCST008084 HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) 56,505 European ancestry current drinkers, 9,870 African American current drinkers, 2,491 Asian ancestry current drinkers, 2,528 Hispanic current drinkers, 33,388 European ancestry non-drinkers, 11,119 African American non-drinkers, 9,959 Asian ancestry non-drinkers, 1,466 Hispanic non-drinkers C NR 3E-35 34.523 rs150844304 N/A alcohol drinking (EFO:0004329)
high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:30698716
GWAS1121743_H GCST008084 HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) 56,505 European ancestry current drinkers, 9,870 African American current drinkers, 2,491 Asian ancestry current drinkers, 2,528 Hispanic current drinkers, 33,388 European ancestry non-drinkers, 11,119 African American non-drinkers, 9,959 Asian ancestry non-drinkers, 1,466 Hispanic non-drinkers C NR 8E-33 32.097 rs150844304 N/A alcohol drinking (EFO:0004329)
high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:30698716
GWAS1121902_H GCST008087 Triglyceride levels in current drinkers 56,505 European ancestry individuals, 9,870 African American individuals, 2,491 Asian ancestry individuals, 2,528 Hispanic individuals C NR 8E-29 28.097 rs150844304 0.09 triglyceride measurement (EFO:0004530)
PMID:30698716
GWAS1122052_H GCST008087 Triglyceride levels in current drinkers 56,505 European ancestry individuals, 9,870 African American individuals, 2,491 Asian ancestry individuals, 2,528 Hispanic individuals C NR 3E-27 26.523 rs150844304 0.093 triglyceride measurement (EFO:0004530)
PMID:30698716
GWAS1122266_H GCST008070 HDL cholesterol levels 89,893 European ancestry individuals, 20,989 African American individuals, 12,450 Asian ancestry individuals, 3,994 HIspanic individuals C NR 1E-11 11 rs150844304 0.03194 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:30698716
GWAS1122471_H GCST008085 HDL cholesterol levels in current drinkers 56,505 European ancestry individuals, 9,870 African American individuals, 2,491 Asian ancestry individuals, 2,528 Hispanic individuals C NR 2E-20 19.699 rs150844304 0.033 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:30698716
GWAS1123306_H GCST008070 HDL cholesterol levels 89,893 European ancestry individuals, 20,989 African American individuals, 12,450 Asian ancestry individuals, 3,994 HIspanic individuals C NR 4E-11 10.398 rs150844304 0.03565 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:30698716
GWAS1124844_H GCST008085 HDL cholesterol levels in current drinkers 56,505 European ancestry individuals, 9,870 African American individuals, 2,491 Asian ancestry individuals, 2,528 Hispanic individuals C NR 7E-19 18.155 rs150844304 0.034 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:30698716
GWAS1134704_H GCST010242 HDL cholesterol levels 403,943 European ancestry individuals A 0.974093 2E-51 50.699 rs150844304 0.0904093 high density lipoprotein cholesterol measurement (EFO:0004612)
PMID:32203549
GWAS1135780_H GCST010241 Apolipoprotein A1 levels 393,193 European ancestry individuals A 0.974051 3E-34 33.523 rs150844304 0.075233 apolipoprotein A 1 measurement (EFO:0004614)
PMID:32203549
GWAS595354_H GCST90002383 Hematocrit 408,112 British individuals C 0.025291 6E-34 33.222 rs150844304 0.08552511 hematocrit (EFO:0004348)
PMID:32888494
GWAS601251_H GCST003661 Triglycerides 41,142 European ancestry individuals, 705 East Asian ancestry individuals, 6,287 African American individuals, 1,415 Hispanic individuals A 0.96 1E-15 15 rs150844304 0.066 triglyceride measurement (EFO:0004530)
PMID:27036123
GWAS1143718_H GCST007069 Red blood cell count approximately 445,000 European ancestry individuals ? NR 1E-12 12 rs150844304 N/A erythrocyte count (EFO:0004305)
PMID:30595370
GWAS1144548_H GCST009777 C-reactive protein levels 418,642 British ancestry individuals A 0.975286 4E-32 31.398 rs150844304 0.0769327 C-reactive protein measurement (EFO:0004458)
PMID:31900758
1 to 20 of 180 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST90093015 GWAS Catalog

Note Type Note Reference