GWAS1663133_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1663133_H (HbA1c measurement QTL GWAS1663133 (human)) Homo sapiens

Symbol: GWAS1663133_H
Name: HbA1c measurement QTL GWAS1663133 (human)
RGD ID: 597606273
Trait: HbA1c measurement
Measurement Type: blood hemoglobin A1c level   (CMO:0002786)    
LOD Score: Not Available
P Value: 8.0E-17
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3812132,503,863 - 132,503,864RGD_MAPPER_PIPELINEGRCh38
GRCh3712133,080,449 - 133,080,450RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1663133_HHumanblood hemoglobin A1c level  IAGPrs36098511405850206 GWAS_CATALOGPMID:39024449

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1663133_HHumanHbA1c measurement  IAGPrs36098511405850206 GWAS_CATALOGPMID:39024449

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2303695FBRSL1fibrosin like 112132490151132585188Human


Peak: (rs36098511)
Human AssemblyChrPosition (strand)Source
GRCh3812132,503,863 - 132,503,864RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597284377GWAS1380451_Hglucose measurement QTL GWAS1380451 (human)1e-11glucose measurement12132503863132503864Human
597598668GWAS1655528_HHbA1c measurement QTL GWAS1655528 (human)7e-12HbA1c measurementblood hemoglobin A1c level (CMO:0002786)12132503863132503864Human
597598733GWAS1655593_HHbA1c measurement QTL GWAS1655593 (human)1e-11glucose measurementblood glucose level (CMO:0000046)12132503863132503864Human
597598955GWAS1655815_HHbA1c measurement QTL GWAS1655815 (human)2e-11HbA1c measurementblood hemoglobin A1c level (CMO:0002786)12132503863132503864Human
597606273GWAS1663133_HHbA1c measurement QTL GWAS1663133 (human)8e-17HbA1c measurementblood hemoglobin A1c level (CMO:0002786)12132503863132503864Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1663133_H GCST90475097 Hemoglobin A1c (HbA1c, minimum, inv-norm transformed) 338,640 European ancestry individuals A 0.6867 8E-17 16.097 rs36098511 0.02583 HbA1c measurement (EFO:0004541)
 PMID:39024449
GWAS1655528_H GCST90479502 Hemoglobin A1c (HbA1c, minimum, inv-norm transformed) 98,578 African American or Afro-Caribbean individuals, 49,152 Hispanic or Latin American individuals, 5,466 East Asian ancestry individuals, 338,640 European ancestry individuals A 0.7398 7E-12 11.155 rs36098511 0.02493 HbA1c measurement (EFO:0004541)
 PMID:39024449
GWAS1655593_H GCST90479501 Hemoglobin A1c (HbA1c, mean, inv-norm transformed) 98,735 African American or Afro-Caribbean individuals, 49,225 Hispanic or Latin American individuals, 5,475 East Asian ancestry individuals, 338,848 European ancestry individuals A 0.7398 1E-11 11 rs36098511 0.02542 HbA1c measurement (EFO:0004541)
 PMID:39024449
GWAS1655815_H GCST90479500 Hemoglobin A1c (HbA1c, maximum, inv-norm transformed) 98,772 African American or Afro-Caribbean individuals, 49,229 Hispanic or Latin American individuals, 5,477 East Asian ancestry individuals, 338,857 European ancestry individuals A 0.7398 2E-11 10.699 rs36098511 0.02457 HbA1c measurement (EFO:0004541)
 PMID:39024449
GWAS1380451_H GCST90018955 Glucose levels 314,916 European ancestry individuals, 133,336 East Asian ancestry individuals T NR 1E-11 11 rs36098511 0.0162 glucose measurement (EFO:0004468)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90475097 GWAS Catalog

Note Type Note Reference