QTL: GWAS1661961_H (type 2 diabetes mellitus QTL GWAS1661961 (human)) Homo sapiens
Symbol:
GWAS1661961_H
Name:
type 2 diabetes mellitus QTL GWAS1661961 (human)
RGD ID:
597605101
Trait:
type 2 diabetes mellitus
LOD Score:
Not Available
P Value:
3.0E-14
Variance:
Not Available
Position
Human Assembly Chr Position (strand) Source JBrowse GRCh38 15 43,602,920 - 43,602,921 RGD_MAPPER_PIPELINE GRCh38 GRCh37 15 43,895,118 - 43,895,119 RGD_MAPPER_PIPELINE GRCh37
Population Stats:
Not Available
JBrowse:
View Region in Genome Browser (JBrowse)
Model
1344167 STRC stereocilin 15 43599563 43618800 Human
Peak: (rs2447198 )
Human Assembly Chr Position (strand) Source GRCh38 15 43,602,920 - 43,602,921 RGD_MAPPER_PIPELINE
2289410 BW327_H Body weight QTL 327 (human) 3.32 0.0001 Body fat amount 15 19980129 45980129 Human 1643273 BW330_H Body Weight QTL 330 (human) 1.05 0.014 Body weight body mass index 15 26866719 52866719 Human 597086676 GWAS1182750_H type 2 diabetes mellitus QTL GWAS1182750 (human) 5e-10 type 2 diabetes mellitus 15 43602920 43602921 Human 597605101 GWAS1661961_H type 2 diabetes mellitus QTL GWAS1661961 (human) 3e-14 type 2 diabetes mellitus 15 43602920 43602921 Human 2289430 BMD7_H Bone mineral density QTL 7 (human) 3.32 0.0001 Bone mineral density 15 19980129 45980129 Human 1559411 SCL107_H Serum cholesterol level QTL 107 (human) 3.88 Lipid level triglyceride 15 26543552 52543552 Human 2299958 PRSTS330_H Prostate tumor susceptibility QTL 330 (human) 1.02 0.0151 Prostate tumor susceptibility 15 34790230 60790230 Human 1643523 BW284_H Body Weight QTL 284 (human) 1.95 0.0013 Body weight 15 21792889 47792889 Human 1559354 LDLPS4_H Low density lipoprotein particle size QTL 4 (human) 2.2 0.019 LDL particle size 15 34790230 60790230 Human 2289420 BW314_H Body weight QTL 314 (human) 2.72 0.0003 Body weight lean mass 15 19980129 45980129 Human
Data has come from the GWAS Catalog
The highlighted row represents the current QTL
GWAS1661961_H GCST90492734 Type 2 diabetes
50,251 African American cases, 103,909 African American controls, 88,109 East Asian ancestry cases, 339,395 East Asian ancestry controls, 242,283 European ancestry cases, 1,569,734 European ancestry controls, 29,375 Hispanic cases, 59,368 Hispanic controls, 1,602 South African ancestry cases, 976 South African ancestry controls, 16,832 South Asian ancestry cases, 33,767 South Asian ancestry controls
T
0.81259
3E-14
13.523
rs2447198 N/A
PMID:38374256
GWAS1182750_H GCST010557 Type 2 diabetes
148,726 European ancestry cases, 24,646 African American cases, 8,616 Hispanic cases, 46,511 Asian ancestry cases, 965,732 European ancestry controls, 31,446 African American controls, 11,829 Hispanic controls, 169,776 Asian ancestry controls
C
0.2235
5E-10
9.302
rs2447198 0.034
PMID:32541925
