GWAS1629113_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1629113_H (body mass index QTL GWAS1629113 (human)) Homo sapiens

Symbol: GWAS1629113_H
Name: body mass index QTL GWAS1629113 (human)
RGD ID: 597533039
Trait: body mass index
Measurement Type: body mass index (BMI)   (CMO:0000105)    
LOD Score: Not Available
P Value: 4.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38123,277,315 - 23,277,316RGD_MAPPER_PIPELINEGRCh38
GRCh37123,603,808 - 23,603,809RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1629113_HHumanbody mass index (BMI)  IAGPrs10917368405850206 GWAS_CATALOGPMID:37280435

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1629113_HHumanbody mass index  IAGPrs10917368405850206 GWAS_CATALOGPMID:37280435

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs10917368)
Human AssemblyChrPosition (strand)Source
GRCh38123,277,315 - 23,277,316RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597533039GWAS1629113_Hbody mass index QTL GWAS1629113 (human)4e-10body mass indexbody mass index (BMI) (CMO:0000105)12327731523277316Human
597520462GWAS1616536_Hbody mass index QTL GWAS1616536 (human)1e-08body mass indexbody mass index (BMI) (CMO:0000105)12327731523277316Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1629113_H GCST90301650 Body mass index 441,761 European ancestry individuals A NR 4E-10 9.398 rs10917368 0.0219793 body mass index (EFO:0004340)
 PMID:37280435
GWAS1616536_H GCST90428119 Body mass index 342,566 European ancestry individuals G NR 1E-8 8 rs10917368 0.0252006 body mass index (EFO:0004340)
 PMID:38538606
Database
Acc Id
Source(s)
GWAS Catalog GCST90301650 GWAS Catalog

Note Type Note Reference