GWAS1628923_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1628923_H (3-hydroxyoctanoate measurement QTL GWAS1628923 (human)) Homo sapiens

Symbol: GWAS1628923_H
Name: 3-hydroxyoctanoate measurement QTL GWAS1628923 (human)
RGD ID: 597532849
Trait: 3-hydroxyoctanoate measurement
LOD Score: Not Available
P Value: 1.0E-22
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3816,360,601 - 6,360,602RGD_MAPPER_PIPELINEGRCh38
GRCh3716,420,661 - 6,420,662RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1628923_HHuman3-hydroxyoctanoate measurement  IAGPrs146144846405850206 GWAS_CATALOGPMID:36357675

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
733878ACOT7acyl-CoA thioesterase 7162642726393767Human


Peak: (rs146144846)
Human AssemblyChrPosition (strand)Source
GRCh3816,360,601 - 6,360,602RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597532849GWAS1628923_H3-hydroxyoctanoate measurement QTL GWAS1628923 (human)1e-223-hydroxyoctanoate measurement163606016360602Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1628923_H GCST90245028 3-hydroxyoctanoate levels 14,296 European ancestry individuals A 0.0016 1E-22 22 rs146144846 1.2557852 3-hydroxyoctanoate measurement (EFO:0800193)
 PMID:36357675
Database
Acc Id
Source(s)
GWAS Catalog GCST90245028 GWAS Catalog

Note Type Note Reference