GWAS1609355_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1609355_H (peak expiratory flow QTL GWAS1609355 (human)) Homo sapiens

Symbol: GWAS1609355_H
Name: peak expiratory flow QTL GWAS1609355 (human)
RGD ID: 597513281
Trait: peak expiratory flow
Measurement Type: maximum mid-expiratory flow (MMEF)   (CMO:0000253)    
LOD Score: Not Available
P Value: 2.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38110,381,920 - 10,381,921RGD_MAPPER_PIPELINEGRCh38
GRCh37110,441,978 - 10,441,979RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1609355_HHumanmaximum mid-expiratory flow (MMEF)  IAGPrs6541092405850206 GWAS_CATALOGPMID:36914875

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1609355_HHumanpeak expiratory flow  IAGPrs6541092405850206 GWAS_CATALOGPMID:36914875

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs6541092)
Human AssemblyChrPosition (strand)Source
GRCh38110,381,920 - 10,381,921RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597513281GWAS1609355_Hpeak expiratory flow QTL GWAS1609355 (human)2e-10peak expiratory flowmaximum mid-expiratory flow (MMEF) (CMO:0000253)11038192010381921Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1609355_H GCST90244095 Peak expiratory flow 393,161 European ancestry individuals, 4,227 African ancestry individuals, 1,564 East Asian ancestry individuals, 4,270 South Asian ancestry individuals, 2,798 Hispanic or Latin American individuals T 0.883 2E-10 9.699 rs6541092 6.389 peak expiratory flow (EFO:0009718)
 PMID:36914875
Database
Acc Id
Source(s)
GWAS Catalog GCST90244095 GWAS Catalog

Note Type Note Reference