GWAS1605559_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1605559_H (sex hormone-binding globulin measurement QTL GWAS1605559 (human)) Homo sapiens

Symbol: GWAS1605559_H
Name: sex hormone-binding globulin measurement QTL GWAS1605559 (human)
RGD ID: 597509485
Trait: sex hormone-binding globulin measurement
LOD Score: Not Available
P Value: 9.0E-15
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381552,814,751 - 52,814,752RGD_MAPPER_PIPELINEGRCh38
GRCh371553,106,948 - 53,106,949RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1605559_HHumansex hormone-binding globulin measurement  IAGPrs7169500405850206 GWAS_CATALOGPMID:34321204

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
38628548LOC107983981uncharacterized LOC107983981155280375253221654Human


Peak: (rs7169500)
Human AssemblyChrPosition (strand)Source
GRCh381552,814,751 - 52,814,752RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
597509485GWAS1605559_Hsex hormone-binding globulin measurement QTL GWAS1605559 (human)9e-15sex hormone-binding globulin measurement155281475152814752Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1605559_H GCST90027092 Sex hormone-binding globulin levels 158,000 British ancestry women G 0.1 9E-15 14.046 rs7169500 1.79 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:34321204
Database
Acc Id
Source(s)
GWAS Catalog GCST90027092 GWAS Catalog

Note Type Note Reference