GWAS1605340_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1605340_H (BMI-adjusted waist circumference QTL GWAS1605340 (human)) Homo sapiens

Symbol: GWAS1605340_H
Name: BMI-adjusted waist circumference QTL GWAS1605340 (human)
RGD ID: 597509266
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3866,756,172 - 6,756,173RGD_MAPPER_PIPELINEGRCh38
GRCh3766,756,405 - 6,756,406RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1605340_HHumanbody size trait  IAGPrs9405973405850206 GWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1605340_HHumanBMI-adjusted waist circumference  IAGPrs9405973405850206 GWAS_CATALOGPMID:34021172

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
38645641LOC101928004uncharacterized LOC101928004666947926801171Human
38650697LOC105374901uncharacterized LOC105374901667519066759302Human


Peak: (rs9405973)
Human AssemblyChrPosition (strand)Source
GRCh3866,756,172 - 6,756,173RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human
2292824PRSTS5_HProstate tumor susceptibility QTL 5 (human)Prostate tumor susceptibility6119232373Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
1643495BW291_HBody Weight QTL 291 (human)2.13Body weightBMI6119321359Human
597509266GWAS1605340_HBMI-adjusted waist circumference QTL GWAS1605340 (human)1e-08body size trait (VT:0100005)667561726756173Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1605340_H GCST90020029 Waist circumference adjusted for body mass index 219,872 British ancestry women A NR 1E-8 8 rs9405973 0.0166219 BMI-adjusted waist circumference (EFO:0007789)
 PMID:34021172
Database
Acc Id
Source(s)
GWAS Catalog GCST90020029 GWAS Catalog

Note Type Note Reference