GWAS1598966_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1598966_H (insomnia QTL GWAS1598966 (human)) Homo sapiens

Symbol: GWAS1598966_H
Name: insomnia QTL GWAS1598966 (human)
RGD ID: 597502892
Trait: insomnia
LOD Score: Not Available
P Value: 3.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38588,392,604 - 88,392,605RGD_MAPPER_PIPELINEGRCh38
GRCh37587,688,421 - 87,688,422RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1598966_HHumanSleep Initiation and Maintenance Disorders  IAGPrs17318932405850206 GWAS_CATALOGPMID:35835914

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1598966_HHumanInsomnia  IAGPrs17318932405850206 GWAS_CATALOGPMID:35835914
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1598966_HHumaninsomnia  IAGPrs17318932405850206 GWAS_CATALOGPMID:35835914

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
6480801TMEM161B-DTTMEM161B divergent transcript58826888288436674Human


Peak: (rs17318932)
Human AssemblyChrPosition (strand)Source
GRCh38588,392,604 - 88,392,605RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597502892GWAS1598966_Hinsomnia QTL GWAS1598966 (human)3e-08insomnia58839260488392605Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1598966_H GCST90131901 Insomnia 593,724 European ancestry cases, 1,771,286 European ancestry controls T NR 3E-8 7.523 rs17318932 0.011 insomnia (EFO:0004698)
 PMID:35835914
Database
Acc Id
Source(s)
GWAS Catalog GCST90131901 GWAS Catalog

Note Type Note Reference