GWAS1593125_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1593125_H (diastolic blood pressure QTL GWAS1593125 (human)) Homo sapiens

Symbol: GWAS1593125_H
Name: diastolic blood pressure QTL GWAS1593125 (human)
RGD ID: 597497051
Trait: diastolic blood pressure
Measurement Type: diastolic blood pressure   (CMO:0000005)    
LOD Score: Not Available
P Value: 3.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3819,150,203 - 9,150,204RGD_MAPPER_PIPELINEGRCh38
GRCh3719,210,262 - 9,210,263RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1593125_HHumandiastolic blood pressure  IAGPrs17393144405850206 GWAS_CATALOGPMID:38689001

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1593125_HHumandiastolic blood pressure  IAGPrs17393144405850206 GWAS_CATALOGPMID:38689001

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
10401741MIR34AHGMIR34A host gene191480119182338Human


Peak: (rs17393144)
Human AssemblyChrPosition (strand)Source
GRCh3819,150,203 - 9,150,204RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597523531GWAS1619605_Hpulse pressure measurement QTL GWAS1619605 (human)1e-16pulse pressure measurementpulse pressure (CMO:0000292)191502039150204Human
597497051GWAS1593125_Hdiastolic blood pressure QTL GWAS1593125 (human)0.000003diastolic blood pressurediastolic blood pressure (CMO:0000005)191502039150204Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1593125_H GCST90310295 Diastolic blood pressure 1,028,980 European ancestry individuals A NR 0.000003 5.523 rs17393144 0.0754 diastolic blood pressure (EFO:0006336)
 PMID:38689001
GWAS1619605_H GCST90310296 Pulse pressure 1,028,980 European ancestry individuals A NR 1E-16 16 rs17393144 0.1529 pulse pressure measurement (EFO:0005763)
 PMID:38689001
Database
Acc Id
Source(s)
GWAS Catalog GCST90310295 GWAS Catalog

Note Type Note Reference