GWAS1583061_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1583061_H (docosahexaenoic acid measurement QTL GWAS1583061 (human)) Homo sapiens

Symbol: GWAS1583061_H
Name: docosahexaenoic acid measurement QTL GWAS1583061 (human)
RGD ID: 597486987
Trait: fatty acid amount   (VT:0010046)    
Measurement Type: blood free fatty acids level   (CMO:0000117)    
LOD Score: Not Available
P Value: 4.0E-25
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38611,054,512 - 11,054,513RGD_MAPPER_PIPELINEGRCh38
GRCh37611,054,745 - 11,054,746RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1583061_HHumanblood free fatty acids level  IAGPrs146655629405850206 GWAS_CATALOGPMID:38448586

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1583061_HHumanfatty acid amount  IAGPrs146655629405850206 GWAS_CATALOGPMID:38448586

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1583061_HHumandocosahexaenoic acid measurement  IAGPrs146655629405850206 GWAS_CATALOGPMID:38448586

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
6770589ELOVL2-AS1ELOVL2 antisense RNA 161104375811079144Human


Peak: (rs146655629)
Human AssemblyChrPosition (strand)Source
GRCh38611,054,512 - 11,054,513RGD_MAPPER_PIPELINE


1 to 10 of 12 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
597486987GWAS1583061_Hdocosahexaenoic acid measurement QTL GWAS1583061 (human)4e-25fatty acid amount (VT:0010046)blood free fatty acids level (CMO:0000117)61105451211054513Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2292824PRSTS5_HProstate tumor susceptibility QTL 5 (human)Prostate tumor susceptibility6119232373Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human

1 to 10 of 12 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1583061_H GCST90301955 Docosahexaenoic acid (22:6) levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.2124 4E-25 24.398 rs146655629 0.0519 docosahexaenoic acid measurement (EFO:0007761)
 PMID:38448586
Database
Acc Id
Source(s)
GWAS Catalog GCST90301955 GWAS Catalog

Note Type Note Reference