GWAS1580982_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1580982_H (phosphatidylethanolamine measurement QTL GWAS1580982 (human)) Homo sapiens

Symbol: GWAS1580982_H
Name: phosphatidylethanolamine measurement QTL GWAS1580982 (human)
RGD ID: 597484908
Trait: phosphatidylethanolamine measurement
LOD Score: Not Available
P Value: 2.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381558,438,928 - 58,438,929RGD_MAPPER_PIPELINEGRCh38
GRCh371558,731,127 - 58,731,128RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1580982_HHumanphosphatidylethanolamine measurement  IAGPrs61182920405850206 GWAS_CATALOGPMID:35668104

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
736877LIPClipase C, hepatic type155843199158569844Human
11084824LIPC-AS1LIPC antisense RNA 1155843490158498735Human


Peak: (rs61182920)
Human AssemblyChrPosition (strand)Source
GRCh381558,438,928 - 58,438,929RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597484908GWAS1580982_Hphosphatidylethanolamine measurement QTL GWAS1580982 (human)2e-08phosphatidylethanolamine measurement155843892858438929Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1580982_H GCST90024345 Phosphatidylethanolamine (15-MHDA_18:1) levels 4,492 European ancestry individuals T NR 2E-8 7.699 rs61182920 0.232 phosphatidylethanolamine measurement (EFO:0010228)
 PMID:35668104
Database
Acc Id
Source(s)
GWAS Catalog GCST90024345 GWAS Catalog

Note Type Note Reference