GWAS1576195_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1576195_H (carbonic anhydrase 6 measurement QTL GWAS1576195 (human)) Homo sapiens

Symbol: GWAS1576195_H
Name: carbonic anhydrase 6 measurement QTL GWAS1576195 (human)
RGD ID: 597480121
Trait: carbonic anhydrase 6 measurement
LOD Score: Not Available
P Value: 9.0E-17
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3818,945,210 - 8,945,211RGD_MAPPER_PIPELINEGRCh38
GRCh3719,005,269 - 9,005,270RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1576195_HHumancarbonic anhydrase 6 measurement  IAGPrs11809994405850206 GWAS_CATALOGPMID:35870639

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs11809994)
Human AssemblyChrPosition (strand)Source
GRCh3818,945,210 - 8,945,211RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597480121GWAS1576195_Hcarbonic anhydrase 6 measurement QTL GWAS1576195 (human)9e-17carbonic anhydrase 6 measurement189452108945211Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1576195_H GCST90234072 Carbonic anhydrase 6 level in Chronic kidney disease with hypertension and no diabetes (13747_9) 466 African American individuals C 0.18 9E-17 16.046 rs11809994 0.64 carbonic anhydrase 6 measurement (EFO:0008068)
 PMID:35870639
Database
Acc Id
Source(s)
GWAS Catalog GCST90234072 GWAS Catalog

Note Type Note Reference